SCOPe 2.03: Domain d4jtgd_: 4jtg D:

Lineage for d4jtgd_ (4jtg D:)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.4: Class I DAHP synthetase [51599] (3 proteins)

6. Protein automated matches [190083] (7 species)
   not a true protein

7. Species Neisseria meningitidis [TaxId:122586] [189819] (16 PDB entries)

8. Domain d4jtgd_: 4jtg D: [224003]
   automated match to d3undc_
   complexed with cl, gol, na; mutant

Details for d4jtgd_

PDB Entry: 4jtg, 1.85 Å

PDB Description: Crystal structure of F114R/R117A mutant of 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis

PDB Compounds: (D:) 2-dehydro-3-deoxyphosphooctonate aldolase

SCOPe Domain Sequences for d4jtgd_:

Sequence, based on SEQRES records:

>d4jtgd_ c.1.10.4 (D:) automated matches {Neisseria meningitidis [TaxId: 122586]}
mdikinditlgnnspfvlfgginvlesldstlqtcahyvevtrklgipyifkasfdkanr
ssihsyrgvgleeglkifekvkaefgipvitdvhephqcqpvaevcdviqlparlaaqtd
lvvamaktgnvvnikkpqflspsqmknivekfheagngklilcergssfgydnlvvdmlg
fgvmkqtcgnlpvifdvthslqtrdagsaasggrraqaldlalagmatrlaglfleshpd
pklakcdgpsalplhlledflirikalddliksqpil

Sequence, based on observed residues (ATOM records):

>d4jtgd_ c.1.10.4 (D:) automated matches {Neisseria meningitidis [TaxId: 122586]}
mdikinditlgnnspfvlfgginvlesldstlqtcahyvevtrklgipyifkasfdkanr
ssihsyrgvgleeglkifekvkaefgipvitdvhephqcqpvaevcdviqlparlaaqtd
lvvamaktgnvvnikkpqflspsqmknivekfheagngklilcergssfgydnlvvdmlg
fgvmkqtcgnlpvifdvthslqtrgrraqaldlalagmatrlaglfleshalplhlledf
lirikalddliksqpil

Timeline for d4jtgd_:

• d4jtgd_ is new in SCOPe 2.03-stable
  
• d4jtgd_ appears in SCOPe 2.04
  
• d4jtgd_ appears in the current release, SCOPe 2.08