Lineage for d4j88a_ (4j88 A:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2508387Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 2508388Superfamily d.22.1: GFP-like [54511] (3 families) (S)
  5. 2508389Family d.22.1.1: Fluorescent proteins [54512] (6 protein domains)
  6. 2508393Protein Green fluorescent protein, GFP [54513] (4 species)
  7. 2508399Species Jellyfish (Aequorea victoria) [TaxId:6100] [54514] (202 PDB entries)
    Uniprot P42212
  8. 2508524Domain d4j88a_: 4j88 A: [223619]
    automated match to d3ztfa_
    complexed with edo, so4, trs

Details for d4j88a_

PDB Entry: 4j88 (more details), 2.08 Å

PDB Description: Dark-state structure of sfGFP containing the unnatural amino acid p-azido-phenylalanine at residue 66
PDB Compounds: (A:) Green fluorescent protein

SCOPe Domain Sequences for d4j88a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4j88a_ d.22.1.1 (A:) Green fluorescent protein, GFP {Jellyfish (Aequorea victoria) [TaxId: 6100]}

SCOPe Domain Coordinates for d4j88a_:

Click to download the PDB-style file with coordinates for d4j88a_.
(The format of our PDB-style files is described here.)

Timeline for d4j88a_: