Lineage for d4j5xd_ (4j5x D:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2008476Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. 2008477Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families) (S)
  5. 2008478Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 protein domains)
  6. 2009403Protein automated matches [190059] (14 species)
    not a true protein
  7. 2009425Species Human (Homo sapiens) [TaxId:9606] [187214] (173 PDB entries)
  8. 2009639Domain d4j5xd_: 4j5x D: [223562]
    automated match to d1lbda_
    complexed with srl

Details for d4j5xd_

PDB Entry: 4j5x (more details), 2.8 Å

PDB Description: crystal structure of the sr12813-bound pxr/rxralpha lbd heterotetramer complex
PDB Compounds: (D:) Retinoic acid receptor RXR-alpha, Nuclear receptor coactivator 1

SCOPe Domain Sequences for d4j5xd_:

Sequence, based on SEQRES records: (download)

>d4j5xd_ a.123.1.1 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
edmpverileaelavepktetyveanmglnpsspndpvtnicqaadkqlftlvewakrip
hfselplddqvillragwnelliasfshrsiavkdgillatglhvhrnsahsagvgaifd
rvltelvskmrdmqmdktelgclraivlfnpdskglsnpaevealrekvyasleayckhk
ypeqpgrfaklllrlpalrsiglkclehlfffkligdtpidtflmemleaphqmtggsgg
sshsslterhkilhrllqe

Sequence, based on observed residues (ATOM records): (download)

>d4j5xd_ a.123.1.1 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
edmpverileaelavepktetyveanmglnpndpvtnicqaadkqlftlvewakriphfs
elplddqvillragwnelliasfshrsiavkdgillatglhvhrnsahsagvgaifdrvl
telvskmrdmqmdktelgclraivlfnpdskglsnpaevealrekvyasleayckhkype
qpgrfaklllrlpalrsiglkclehlfffkligdtpidtflmemleaprhkilhrllqe

SCOPe Domain Coordinates for d4j5xd_:

Click to download the PDB-style file with coordinates for d4j5xd_.
(The format of our PDB-style files is described here.)

Timeline for d4j5xd_: