Lineage for d4ivqb_ (4ivq B:)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1845072Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 1845073Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families) (S)
    division into families based on beta-sheet topologies
  5. 1845074Family c.37.1.1: Nucleotide and nucleoside kinases [52541] (21 proteins)
    parallel beta-sheet of 5 strands, order 23145
  6. 1845430Protein Thymidine kinase [52552] (3 species)
    contains insert all-alpha subdomain, res. 251-322
  7. 1845444Species Herpes simplex virus type 1, different strains [TaxId:10298] [52553] (33 PDB entries)
    Uniprot P03176 46-375
  8. 1845448Domain d4ivqb_: 4ivq B: [223431]
    automated match to d1e2ka_
    protein/DNA complex; complexed with i43, so4

Details for d4ivqb_

PDB Entry: 4ivq (more details), 1.9 Å

PDB Description: crystal structure of thymidine kinase from herpes simplex virus type 1 in complex with in43/5
PDB Compounds: (B:) Thymidine kinase

SCOPe Domain Sequences for d4ivqb_:

Sequence, based on SEQRES records: (download)

>d4ivqb_ c.37.1.1 (B:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
mptllrvyidgphgmgkttttqllvalgsrddivyvpepmtywrvlgasetianiyttqh
rldqgeisagdaavvmtsaqitmgmpyavtdavlaphiggeagsshapppaltlifdrhp
iaallcypaarylmgsmtpqavlafvalipptlpgtnivlgalpedrhidrlakrqrpge
rldlamlaairrvygllantvrylqcggswredwgqlsgtavppqgaepqsnagprphig
dtlftlfrapellapngdlynvfawaldvlakrlrsmhvfildydqspagcrdallqlts
gmvqthvttpgsipticdlartfaremge

Sequence, based on observed residues (ATOM records): (download)

>d4ivqb_ c.37.1.1 (B:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
mptllrvyidgphgmgkttttqllvalgsrddivyvpepmtywrvlgasetianiyttqh
rldqgeisagdaavvmtsaqitmgmpyavtdavlaphiggeapppaltlifdrhpiaall
cypaarylmgsmtpqavlafvalipptlpgtnivlgalpedrhidrlakrqrpgerldla
mlaairrvygllantvrylqcggswredwgqlsgprphigdtlftlfrapellapngdly
nvfawaldvlakrlrsmhvfildydqspagcrdallqltsgmvqthvttpgsipticdla
rtfaremge

SCOPe Domain Coordinates for d4ivqb_:

Click to download the PDB-style file with coordinates for d4ivqb_.
(The format of our PDB-style files is described here.)

Timeline for d4ivqb_: