SCOPe 2.06: Domain d4i6ja1: 4i6j A:21-225

Lineage for d4i6ja1 (4i6j A:21-225)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.28: Cryptochrome/photolyase, N-terminal domain [52424] (1 superfamily)
   3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; Rossmann-like

4. Superfamily c.28.1: Cryptochrome/photolyase, N-terminal domain [52425] (2 families)
   automatically mapped to Pfam PF00875

5. Family c.28.1.0: automated matches [227292] (1 protein)
   not a true family

6. Protein automated matches [227113] (2 species)
   not a true protein

7. Species Mouse (Mus musculus) [TaxId:10090] [226619] (5 PDB entries)

8. Domain d4i6ja1: 4i6j A:21-225 [222958]
   Other proteins in same PDB: d4i6jc1, d4i6jc2
   automated match to d1qnfa2

Details for d4i6ja1

PDB Entry: 4i6j, 2.7 Å

PDB Description: A ubiquitin ligase-substrate complex

PDB Compounds: (A:) Cryptochrome-2

SCOPe Domain Sequences for d4i6ja1:

Sequence; same for both SEQRES and ATOM records:

>d4i6ja1 c.28.1.0 (A:21-225) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
assvhwfrkglrlhdnpallaavrgarcvrcvyildpwfaasssvginrwrfllqsledl
dtslrklnsrlfvvrgqpadvfprlfkewgvtrltfeydsepfgkerdaaimkmakeagv
evvtenshtlydldriielngqkppltykrfqalisrmelpkkpavavssqqmescraei
qenhddtygvpsleelgfpteglgp

Timeline for d4i6ja1:

• d4i6ja1 first appeared in SCOPe 2.03
  
• d4i6ja1 appears in SCOPe 2.05
  
• d4i6ja1 appears in SCOPe 2.07
  
• d4i6ja1 appears in the current release, SCOPe 2.08