Lineage for d4gypb2 (4gyp B:138-446)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2086988Superfamily c.1.11: Enolase C-terminal domain-like [51604] (3 families) (S)
    binds metal ion (magnesium or manganese) in conserved site inside barrel
    N-terminal alpha+beta domain is common to this superfamily
  5. 2087095Family c.1.11.2: D-glucarate dehydratase-like [51609] (15 protein domains)
  6. 2087112Protein D-glucarate dehydratase [51610] (2 species)
  7. 2087113Species Escherichia coli [TaxId:562] [51612] (7 PDB entries)
  8. 2087115Domain d4gypb2: 4gyp B:138-446 [222277]
    Other proteins in same PDB: d4gypa1, d4gypb1, d4gypc1, d4gypc2, d4gypd1, d4gypd2
    automated match to d1ec7d1
    complexed with cit, gol, mg, p6g, peg, so4

Details for d4gypb2

PDB Entry: 4gyp (more details), 2.1 Å

PDB Description: crystal structure of the heterotetrameric complex of glucd and glucdrp from e. coli k-12 mg1655 (efi target efi-506058)
PDB Compounds: (B:) glucarate dehydratase

SCOPe Domain Sequences for d4gypb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d4gypb2 c.1.11.2 (B:138-446) D-glucarate dehydratase {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d4gypb2:

Click to download the PDB-style file with coordinates for d4gypb2.
(The format of our PDB-style files is described here.)

Timeline for d4gypb2: