SCOPe 2.08: Domain d4gcxa_: 4gcx A:

Lineage for d4gcxa_ (4gcx A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family)

5. Family c.1.20.1: tRNA-guanine transglycosylase [51714] (2 proteins)

6. Protein Queosine tRNA-guanine transglycosylase [51715] (3 species)
   contains zinc-binding subdomain

7. Species Zymomonas mobilis [TaxId:264203] [224878] (22 PDB entries)

8. Domain d4gcxa_: 4gcx A: [221845]
   automated match to d4h6ea_
   protein/RNA complex; complexed with gol, prf, zn; mutant

Details for d4gcxa_

PDB Entry: 4gcx, 1.42 Å

PDB Description: tRNA-guanine transglycosylase Y106F, C158V, V233G mutant in complex with preQ1

PDB Compounds: (A:) Queuine tRNA-ribosyltransferase

SCOPe Domain Sequences for d4gcxa_:

Sequence, based on SEQRES records:

>d4gcxa_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 264203]}
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilgn
tyhlmlrpgaeriaklgglhsfmgwdrpiltdsggfqvmslssltkqseegvtfkshldg
srhmlspersieiqhllgsdivmafdevtpypatpsraassmersmrwakrsrdafdsrk
eqaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglaggegqdemfrvldfsvpm
lpddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsed
lkpldsechcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegrf
sqfaqdfraryfa

Sequence, based on observed residues (ATOM records):

>d4gcxa_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 264203]}
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilgn
tyhlmlrpgaeriaklgglhsfmgwdrpiltdsggfqvmstkqseegvtfkshldgsrhm
lspersieiqhllgsdivmafdevtpypatpsraassmersmrwakrsrdafdsrkeqae
naalfgiqqgsvfenlrqqsadalaeigfdgyavgglaggegqdemfrvldfsvpmlpdd
kphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsedlkpl
dsechcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegrfsqfa
qdfraryfa

Timeline for d4gcxa_:

• d4gcxa_ first appeared in SCOPe 2.03
  
• d4gcxa_ appears in SCOPe 2.07