Lineage for d4fr6a_ (4fr6 A:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2089551Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family) (S)
  5. 2089552Family c.1.20.1: tRNA-guanine transglycosylase [51714] (2 protein domains)
  6. 2089563Protein Queosine tRNA-guanine transglycosylase [51715] (3 species)
    contains zinc-binding subdomain
  7. 2089569Species Zymomonas mobilis [TaxId:264203] [224878] (22 PDB entries)
  8. 2089578Domain d4fr6a_: 4fr6 A: [221479]
    automated match to d1r5ya_
    protein/RNA complex; complexed with 0v3, zn

Details for d4fr6a_

PDB Entry: 4fr6 (more details), 1.59 Å

PDB Description: tRNA-Guanine Transglycosylase cocrystallized with pyridyl-alkine-substituted lin-benzoguanine ligand
PDB Compounds: (A:) Queuine tRNA-ribosyltransferase

SCOPe Domain Sequences for d4fr6a_:

Sequence, based on SEQRES records: (download)

>d4fr6a_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 264203]}
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilgn
tyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfkshldg
srhmlspersieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsrk
eqaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpm
lpddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsed
lkpldsechcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegrf
sqfaqdfraryf

Sequence, based on observed residues (ATOM records): (download)

>d4fr6a_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 264203]}
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtadiilgntyhlmlrpgaeriakl
gglhsfmgwdrpiltdsggyqvmslsqseegvtflspersieiqhllgsdivmafdectp
ypatpsraassmersmrwakrsrdafdsrkeqaenaalfgiqqgsvfenlrqqsadalae
igfdgyavgglavgegqdemfrvldfsvpmlpddkphylmgvgkpddivgavergidmfd
cvlptrsgrngqaftwdgpinirnarfsedlkpldsechcavcqkwsrayihhliragei
lgamlmtehniafyqqlmqkirdsisegrfsqfaqdfraryf

SCOPe Domain Coordinates for d4fr6a_:

Click to download the PDB-style file with coordinates for d4fr6a_.
(The format of our PDB-style files is described here.)

Timeline for d4fr6a_: