Lineage for d4ffbb1 (4ffb B:1-243)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2107739Fold c.32: Tubulin nucleotide-binding domain-like [52489] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
  4. 2107740Superfamily c.32.1: Tubulin nucleotide-binding domain-like [52490] (2 families) (S)
    automatically mapped to Pfam PF00091
  5. 2107977Family c.32.1.0: automated matches [227136] (1 protein)
    not a true family
  6. 2107978Protein automated matches [226838] (4 species)
    not a true protein
  7. 2107993Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [224885] (2 PDB entries)
  8. 2107995Domain d4ffbb1: 4ffb B:1-243 [221163]
    Other proteins in same PDB: d4ffba2, d4ffbb2
    automated match to d1tubb1
    complexed with gtp, mg

Details for d4ffbb1

PDB Entry: 4ffb (more details), 2.88 Å

PDB Description: A TOG:alpha/beta-tubulin Complex Structure Reveals Conformation-Based Mechanisms For a Microtubule Polymerase
PDB Compounds: (B:) Tubulin beta chain

SCOPe Domain Sequences for d4ffbb1:

Sequence, based on SEQRES records: (download)

>d4ffbb1 c.32.1.0 (B:1-243) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
mreiihistgqcgnqigaafweticgehgldfngtyhghddiqkerlnvyfneassgkwv
prsinvdlepgtidavrnsaignlfrpdnyifgqssagnvwakghytegaelvdsvmdvi
rreaegcdslqgfqithslgggtgsgmgtlliskireefpdrmmatfsvlpspkrsdtrv
epynatlsvhqlvehsdetfcidnealydicqrtlklnqpsygdlnnlvssvmsgvttsl
ryp

Sequence, based on observed residues (ATOM records): (download)

>d4ffbb1 c.32.1.0 (B:1-243) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
mreiihistgqcgnqigaafweticgehgldfngthddiqkerlnvyfneassgkwvprs
invdlepgtidavrnsaignlfrpdnyifgqssagnvwakghytegaelvdsvmdvirre
aegcdslqgfqithslgggtgsgmgtlliskireefpdrmmatfsvlpspktrvepynat
lsvhqlvehsdetfcidnealydicqrtlklnqpsygdlnnlvssvmsgvttslryp

SCOPe Domain Coordinates for d4ffbb1:

Click to download the PDB-style file with coordinates for d4ffbb1.
(The format of our PDB-style files is described here.)

Timeline for d4ffbb1:

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Domains from same chain:
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d4ffbb2