SCOPe 2.08: Domain d4ffba2: 4ffb A:247-439

Lineage for d4ffba2 (4ffb A:247-439)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
   core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest

4. Superfamily d.79.2: Tubulin C-terminal domain-like [55307] (2 families)

5. Family d.79.2.0: automated matches [227141] (1 protein)
   not a true family

6. Protein automated matches [226843] (9 species)
   not a true protein

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [224936] (2 PDB entries)

8. Domain d4ffba2: 4ffb A:247-439 [221162]
   Other proteins in same PDB: d4ffba1, d4ffbb1
   automated match to d1jffa2
   complexed with gtp, mg

Details for d4ffba2

PDB Entry: 4ffb, 2.88 Å

PDB Description: A TOG:alpha/beta-tubulin Complex Structure Reveals Conformation-Based Mechanisms For a Microtubule Polymerase

PDB Compounds: (A:) Tubulin alpha-1 chain

SCOPe Domain Sequences for d4ffba2:

Sequence, based on SEQRES records:

>d4ffba2 d.79.2.0 (A:247-439) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
gslnvdlnefqtnlvpyprihfplvsyspvlskskafhesnsvseitnacfepgnqmvkc
dprdgkymatcllyrgdvvtrdvqraveqvknkktvqlvdwcptgfkigicyepptatpn
sqlatvdravcmlsnttsiaeawkridrkfdlmyakrafvhwyvgegmeegeftearedl
aalerdyievgad

Sequence, based on observed residues (ATOM records):

>d4ffba2 d.79.2.0 (A:247-439) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
gslnvdlnefqtnlvpyprihfplvsyspvlsksesnsvseitnacfepgnqmvkcdprd
gkymatcllyrgdvvtrdvqraveqvknkktvqlvdwcptgfkigicyepptatpnsqla
tvdravcmlsnttsiaeawkridrkfdlmyakrafvhwyvgegmeegeftearedlaale
rdyievgad

Timeline for d4ffba2:

• d4ffba2 first appeared in SCOPe 2.03
  
• d4ffba2 appears in SCOPe 2.07