Lineage for d4emzm_ (4emz M:)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2033752Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
    sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
  4. 2034700Superfamily b.2.7: Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor [49447] (2 families) (S)
    duplication: one domain of this fold is inserted into another domain of the same fold
  5. 2034712Family b.2.7.0: automated matches [195107] (1 protein)
    not a true family
  6. 2034713Protein automated matches [195108] (2 species)
    not a true protein
  7. 2034716Species Mouse (Mus musculus) [TaxId:10090] [195109] (2 PDB entries)
  8. 2034720Domain d4emzm_: 4emz M: [220673]
    automated match to d4en2m_

Details for d4emzm_

PDB Entry: 4emz (more details), 2.9 Å

PDB Description: HIV-1 Nef in complex with MHC-I cytoplasmic domain and Mu1 adaptin subunit of AP1 adaptor (second domain)
PDB Compounds: (M:) AP-1 complex subunit mu-1

SCOPe Domain Sequences for d4emzm_:

Sequence, based on SEQRES records: (download)

>d4emzm_ b.2.7.0 (M:) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
wrsegikyrknevfldvieavnllvsangnvlrseivgsikmrvflsgmpelrlglndkv
lfdntgrgksksveledvkfhqcvrlsrfendrtisfippdgefelmsyrlnthvkpliw
iesviekhshsrieymvkaksqfkrrstannveihipvpndadspkfkttvgsvkwvpen
seivwsvksfpggkeylmrahfglpsveaedkegkppisvkfeipyfttsgiqvrylkii
eksgyqalpwvryitqngdyqlrtq

Sequence, based on observed residues (ATOM records): (download)

>d4emzm_ b.2.7.0 (M:) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
wrsegikyrknevfldvieavnllvsangnvlrseivgsikmrvflsgmpelrlglndkv
lfdntgrgksksveledvkfhqcvrlsrfendrtisfippdgefelmsyrlnthvkpliw
iesviekhshsrieymvkaksqfkrrstannveihipvpndadspkfkttvgsvkwvpen
seivwsvksfpggkeylmrahfglkppisvkfeipyfttsgiqvrylkiieksgyqalpw
vryitqngdyqlrtq

SCOPe Domain Coordinates for d4emzm_:

Click to download the PDB-style file with coordinates for d4emzm_.
(The format of our PDB-style files is described here.)

Timeline for d4emzm_:

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d4emza_