SCOPe 2.08: Domain d4emld_: 4eml D:

Lineage for d4emld_ (4eml D:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.14: ClpP/crotonase [52095] (1 superfamily)
   core: 4 turns of (beta-beta-alpha)n superhelix

4. Superfamily c.14.1: ClpP/crotonase [52096] (5 families)

5. Family c.14.1.0: automated matches [191346] (1 protein)
   not a true family

6. Protein automated matches [190246] (71 species)
   not a true protein

7. Species Synechocystis sp. [TaxId:1111708] [197025] (3 PDB entries)

8. Domain d4emld_: 4eml D: [220655]
   automated match to d4i4za_
   complexed with bct, cl, gol, mpd, so4

Details for d4emld_

PDB Entry: 4eml, 2.04 Å

PDB Description: Synechocystis sp. PCC 6803 1,4-dihydroxy-2-naphthoyl-coenzyme A synthase (MenB) in complex with bicarbonate

PDB Compounds: (D:) naphthoate synthase

SCOPe Domain Sequences for d4emld_:

Sequence, based on SEQRES records:

>d4emld_ c.14.1.0 (D:) automated matches {Synechocystis sp. [TaxId: 1111708]}
mdwhiakhyddilyykaggiakivinrphkrnafrpqtvfelydafcnarednrigvvll
tgagphsdgkyafcsggdqsvrgeggyiddqgtprlnvldlqrlirsmpkvvialvagya
iggghvlhlvcdltiaadnaifgqtgpkvgsfdggfgssylarivgqkkareiwylcrqy
saqeaermgmvntvvpvdrleeegiqwakeilsksplairclkaafnadcdgqaglqela
gnatllyymteegsegkqaflekrppdfsqypwlp

Sequence, based on observed residues (ATOM records):

>d4emld_ c.14.1.0 (D:) automated matches {Synechocystis sp. [TaxId: 1111708]}
mdwhiakhyddilyykaggiakivinrphkrnafrpqtvfelydafcnarednrigvvll
tgagphsdgkyafcsggdlnvldlqrlirsmpkvvialvagyaiggghvlhlvcdltiaa
dnaifgqtgpkvgsfdggfgssylarivgqkkareiwylcrqysaqeaermgmvntvvpv
drleeegiqwakeilsksplairclkaafnadcdgqaglqelagnatllyymteegsegk
qaflekrppdfsqypwlp

Timeline for d4emld_:

• d4emld_ first appeared in SCOPe 2.03
  
• d4emld_ appears in SCOPe 2.07