SCOPe 2.05: Domain d4egab1: 4ega B:237-606

Lineage for d4egab1 (4ega B:237-606)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
   core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145

4. Superfamily c.26.1: Nucleotidylyl transferase [52374] (6 families)

5. Family c.26.1.0: automated matches [191377] (1 protein)
   not a true family

6. Protein automated matches [190459] (41 species)
   not a true protein

7. Species Trypanosoma brucei [TaxId:999953] [226467] (9 PDB entries)

8. Domain d4egab1: 4ega B:237-606 [220496]
   Other proteins in same PDB: d4egaa2, d4egab2
   automated match to d1rqga2
   protein/RNA complex; complexed with 0p8, dms, gol, met, so4

Details for d4egab1

PDB Entry: 4ega, 2.7 Å

PDB Description: trypanosoma brucei methionyl-trna synthetase in complex with inhibitor chem 1320

PDB Compounds: (B:) Methionyl-tRNA synthetase, putative

SCOPe Domain Sequences for d4egab1:

Sequence, based on SEQRES records:

>d4egab1 c.26.1.0 (B:237-606) automated matches {Trypanosoma brucei [TaxId: 999953]}
kvekvffvtspiyyvnaaphighvystlitdvigryhrvkgervfaltgtdehgqkvaea
akqkqvspydfttavagefkkcfeqmdysidyfirttneqhkavvkelwtkleqkgdiyl
gryegwysisdesfltpqnitdgvdkdgnpckvslesghvvtwvseenymfrlsafrerl
lewyhanpgcivpefrrreviravekglpdlsvsraratlhnwaipvpgnpdhcvyvwld
altnyltgsrlrvdesgkevslvddfnelerfpadvhvigkdilkfhaiywpafllsagl
plpkkivahgwwtkdrkkiskslgnvfdpvekaeefgydalkyfllresgfsddgdysdk
nmiarlngel

Sequence, based on observed residues (ATOM records):

>d4egab1 c.26.1.0 (B:237-606) automated matches {Trypanosoma brucei [TaxId: 999953]}
kvekvffvtspiyyvnaaphighvystlitdvigryhrvkgervfaltgtdehgqkvaea
akqkqvspydfttavagefkkcfeqmdysidyfirttneqhkavvkelwtkleqkgdiyl
gryegwysisdesfltpqnitdckvslesghvvtwvseenymfrlsafrerllewyhanp
gcivpefrrreviravekglpdlsvsraratlhnwaipvpgnpdhcvyvwldaltnyltg
srlrvdesgkevslvddfnelerfpadvhvigkdilkfhaiywpafllsaglplpkkiva
hgwwtkdrkkiskslgnvfdpvekaeefgydalkyfllresgfsddgdysdknmiarlng
el

Timeline for d4egab1:

• d4egab1 first appeared in SCOPe 2.03
  
• d4egab1 appears in SCOPe 2.04
  
• d4egab1 appears in SCOPe 2.06
  
• d4egab1 appears in the current release, SCOPe 2.08