SCOPe 2.08: Domain d4du5b_: 4du5 B:

Lineage for d4du5b_ (4du5 B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.72: Ribokinase-like [53612] (3 superfamilies)
   core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
   potential superfamily: members of this fold have similar functions but different ATP-binding sites

4. Superfamily c.72.1: Ribokinase-like [53613] (6 families)
   has extra strand located between strands 2 and 3

5. Family c.72.1.0: automated matches [191321] (1 protein)
   not a true family

6. Protein automated matches [190117] (50 species)
   not a true protein

7. Species Polaromonas sp. [TaxId:296591] [226331] (1 PDB entry)

8. Domain d4du5b_: 4du5 B: [220034]
   automated match to d3ljsa_
   complexed with cl

Details for d4du5b_

PDB Entry: 4du5, 2.7 Å

PDB Description: crystal structure of pfkb protein from polaromonas sp. js666

PDB Compounds: (B:) PfkB

SCOPe Domain Sequences for d4du5b_:

Sequence, based on SEQRES records:

>d4du5b_ c.72.1.0 (B:) automated matches {Polaromonas sp. [TaxId: 296591]}
aldvitfgeammllvadrpgplehaeafhkrtagaetnvaiglarlglkvgwasrlgtds
mgryllaamaaegidcshvvcdatqktgfqfkgkvtdgsdppveyhrkgsaashmgvadi
deawllsarhlhatgvfpaisattlpaarktmdlmraagrsvsfdpnlrptlwatpelmr
daindlatradwvlpgmeegrfltgettpegvarfyrqlgaklvvvklgaegayfdgeag
sgrvagfpvaevvdtvgagdgfavgvisalldglgvpeavkrgawigaravqvlgdsegl
ptraelnaak

Sequence, based on observed residues (ATOM records):

>d4du5b_ c.72.1.0 (B:) automated matches {Polaromonas sp. [TaxId: 296591]}
aldvitfgeammllvadrpgplehaeafhkrtagaetnvaiglarlglkvgwasrlgtds
mgryllaamaaegidcshvvcdatqktgfqfkgkvtdgppveyhrkgsaashmgvadide
awllsarhlhatgvfpaisattlpaarktmdlmraagrsvsfdpnlrptlwatpelmrda
indlatradwvlpgmeegrfltgettpegvarfyrqlgaklvvvklgaegayfdgeagsg
rvagfpvgagdgfavgvisalldglgvpeavkrgawigaravqglptraelnaak

Timeline for d4du5b_:

• d4du5b_ first appeared in SCOPe 2.03
  
• d4du5b_ appears in SCOPe 2.07