Lineage for d4dpge1 (4dpg E:72-221)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2049950Fold b.40: OB-fold [50198] (16 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 2051128Superfamily b.40.4: Nucleic acid-binding proteins [50249] (17 families) (S)
  5. 2052191Family b.40.4.0: automated matches [191416] (1 protein)
    not a true family
  6. 2052192Protein automated matches [190576] (33 species)
    not a true protein
  7. 2052236Species Human (Homo sapiens) [TaxId:9606] [225402] (8 PDB entries)
  8. 2052251Domain d4dpge1: 4dpg E:72-221 [219913]
    Other proteins in same PDB: d4dpga2, d4dpgb2, d4dpgc2, d4dpgd2, d4dpge2, d4dpgf2, d4dpgg2, d4dpgh2
    automated match to d1bbua1
    protein/RNA complex; complexed with ala, apc, lys, mg

Details for d4dpge1

PDB Entry: 4dpg (more details), 2.84 Å

PDB Description: crystal structure of human lysrs: p38/aimp2 complex i
PDB Compounds: (E:) Lysine--tRNA ligase

SCOPe Domain Sequences for d4dpge1:

Sequence, based on SEQRES records: (download)

>d4dpge1 b.40.4.0 (E:72-221) automated matches {Human (Homo sapiens) [TaxId: 9606]}
dpnqyykirsqaihqlkvngedpyphkfhvdisltdfiqkyshlqpgdhltditlkvagr
ihakrasggklifydlrgegvklqvmansrnykseeefihinnklrrgdiigvqgnpgkt
kkgelsiipyeitllspclhmlphlhfglk

Sequence, based on observed residues (ATOM records): (download)

>d4dpge1 b.40.4.0 (E:72-221) automated matches {Human (Homo sapiens) [TaxId: 9606]}
dpnqyykirsqaihqlkvngedpyphkfhvdisltdfiqkyshlqpgdhltditlkvagr
ihakrasggklifydlrgegvklqvmansrnykseeefihinnklrrgdiigvqgnpgkt
kkgelsiipyeitllspclhmlphlk

SCOPe Domain Coordinates for d4dpge1:

Click to download the PDB-style file with coordinates for d4dpge1.
(The format of our PDB-style files is described here.)

Timeline for d4dpge1: