SCOPe 2.08: Domain d4dmwa_: 4dmw A:

Lineage for d4dmwa_ (4dmw A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest

4. Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families)

5. Family c.68.1.0: automated matches [191551] (1 protein)
   not a true family

6. Protein automated matches [190951] (34 species)
   not a true protein

7. Species Clostridium difficile [TaxId:1496] [194953] (2 PDB entries)

8. Domain d4dmwa_: 4dmw A: [219866]
   automated match to d4dmva_
   complexed with mn, udp

Details for d4dmwa_

PDB Entry: 4dmw, 2.5 Å

PDB Description: Crystal structure of the GT domain of Clostridium difficile toxin A (TcdA) in complex with UDP and Manganese

PDB Compounds: (A:) Toxin A

SCOPe Domain Sequences for d4dmwa_:

Sequence, based on SEQRES records:

>d4dmwa_ c.68.1.0 (A:) automated matches {Clostridium difficile [TaxId: 1496]}
sliskeeliklaysirpreneyktiltnldeynklttnnnenkylqlkklnesidvfmnk
yktssrnralsnlkkdilkeviliknsntspveknlhfvwiggevsdialeyikqwadin
aeyniklwydseaflvntlkkaivessttealqlleeeiqnpqfdnmkfykkrmefiydr
qkrfinyyksqinkptvptiddiikshlvseynrdetvlesyrtnslrkinsnhgidira
nslfteqellniysqellnrgnlaaasdivrllalknfggvyldvdmlpgihsdlfktis
rpssigldrwemikleaimkykkyinnytsenfdkldqqlkdnfkliiesksekseifsk
lenlnvsdleikiafalgsvinqaliskqgsyltnlvieqvknryqflnqhlnpaiesdn
nftdttkifhdslfnsataensmfltkiapylqvgfmpearstislsgpgayasayydfi
nlqentiektlkasdliefkfpennlsqlteqeinslwsfdqasakyqfekyvrdyt

Sequence, based on observed residues (ATOM records):

>d4dmwa_ c.68.1.0 (A:) automated matches {Clostridium difficile [TaxId: 1496]}
sliskeeliklaysirpreneyktiltnldeynklttnnnenkylqlkklnesidvfmnk
yktssrnralsnlkkdilkeviliknsntspveknlhfvwiggevsdialeyikqwadin
aeyniklwydseaflvntlkkaivessttealqlleeeiqnpqfdnmkfykkrmefiydr
qkrfinyyksqinkvptiddiikshlvseynrdetvlesyrtnslrkinsnhgidirans
lfteqellniysqellnrgnlaaasdivrllalknfggvyldvdmlpgihsdlfktisrp
ssigldrwemikleaimkykkyinnytsenfdkldqqlkdnfkliiesksekseifskle
nlnvsdleikiafalgsvinqaliskqgsyltnlvieqvknryqflnqhlnpaiesdnnf
tdttkifhdslfnsataensmfltkiapylqvgfmpearstislsgpgayasayydfinl
qentiektlkasdliefkfpennlsqlteqeinslwsfdqasakyqfekyvrdyt

Timeline for d4dmwa_:

• d4dmwa_ first appeared in SCOPe 2.03
  
• d4dmwa_ appears in SCOPe 2.07