SCOPe 2.05: Domain d4dhid_: 4dhi D:

Lineage for d4dhid_ (4dhi D:)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.20: UBC-like [54494] (1 superfamily)
   alpha-beta(4)-alpha(3); core: meander beta-sheet plus one helix 2

4. Superfamily d.20.1: UBC-like [54495] (5 families)

5. Family d.20.1.1: UBC-related [54496] (7 proteins)

6. Protein Ubiquitin conjugating enzyme, UBC [54497] (33 species)

7. Species Human (Homo sapiens), ubc13 [TaxId:9606] [64240] (5 PDB entries)

8. Domain d4dhid_: 4dhi D: [219758]
   Other proteins in same PDB: d4dhib_
   automated match to d1j7db_

Details for d4dhid_

PDB Entry: 4dhi, 1.8 Å

PDB Description: Structure of C. elegans OTUB1 bound to human UBC13

PDB Compounds: (D:) Ubiquitin-conjugating enzyme E2 N

SCOPe Domain Sequences for d4dhid_:

Sequence; same for both SEQRES and ATOM records:

>d4dhid_ d.20.1.1 (D:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc13 [TaxId: 9606]}
glprriiketqrllaepvpgikaepdesnaryfhvviagpqdspfeggtfklelflpeey
pmaapkvrfmtkiyhpnvdklgricldilkdkwspalqirtvllsiqallsapnpddpla
ndvaeqwktneaqaietarawtrlyamnni

Timeline for d4dhid_:

• d4dhid_ first appeared in SCOPe 2.03
  
• d4dhid_ appears in SCOPe 2.04
  
• d4dhid_ appears in SCOPe 2.06
  
• d4dhid_ appears in the current release, SCOPe 2.08