SCOPe 2.07: Domain d4blvb_: 4blv B:

Lineage for d4blvb_ (4blv B:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest

4. Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (60 families)

5. Family c.66.1.0: automated matches [191451] (1 protein)
   not a true family

6. Protein automated matches [190689] (81 species)
   not a true protein

7. Species Escherichia coli K-12 [TaxId:83333] [196426] (9 PDB entries)

8. Domain d4blvb_: 4blv B: [219517]
   automated match to d2oo3a1
   protein/RNA complex; complexed with edo, gol, peg, sam, so4

Details for d4blvb_

PDB Entry: 4blv, 2 Å

PDB Description: Crystal structure of Escherichia coli 23S rRNA (A2030-N6)- methyltransferase RlmJ in complex with S-adenosylmethionine (AdoMet)

PDB Compounds: (B:) Ribosomal RNA large subunit methyltransferase J

SCOPe Domain Sequences for d4blvb_:

Sequence, based on SEQRES records:

>d4blvb_ c.66.1.0 (B:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
lsyrhsfhagnhadvlkhtvqsliieslkekdkpflyldthagagryqlgsehaertgey
legiariwqqddlpaeleayinvvkhfnrsgqlryypgspliarlllreqdslqltelhp
sdypllrsefqkdsrarvekadgfqqlkaklppvsrrglilidppyemktdyqavvsgia
egykrfatgiyalwypvvlrqqikrmihdleatgirkilqielavlpdsdrrgmtasgmi
vinppwkleqqmnnvlpwlhsklvpagtghatvswivpe

Sequence, based on observed residues (ATOM records):

>d4blvb_ c.66.1.0 (B:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
lsyrhsfhagnhadvlkhtvqsliieslkekdkpflyldthagagryqlgsertgeyleg
iariwqqddlpaeleayinvvkhfnrsgqlryypgspliarlllreqdslqltelhpsdy
pllrsefqkdsrarvekadgfqqlkaklppvsrrglilidppyemktdyqavvsgiaegy
krfatgiyalwypvvlrqqikrmihdleatgirkilqielavlpdsdrrgmtasgmivin
ppwkleqqmnnvlpwlhsklvpagtghatvswivpe

Timeline for d4blvb_:

• d4blvb_ first appeared in SCOPe 2.03
  
• d4blvb_ appears in SCOPe 2.06
  
• d4blvb_ appears in the current release, SCOPe 2.08