Lineage for d4blub_ (4blu B:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2129295Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest
  4. 2129296Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (60 families) (S)
  5. 2130608Family c.66.1.0: automated matches [191451] (1 protein)
    not a true family
  6. 2130609Protein automated matches [190689] (64 species)
    not a true protein
  7. 2130665Species Escherichia coli K-12 [TaxId:83333] [196426] (7 PDB entries)
  8. 2130667Domain d4blub_: 4blu B: [219515]
    automated match to d2oo3a1
    complexed with edo, gol, peg, so4, trs

Details for d4blub_

PDB Entry: 4blu (more details), 1.85 Å

PDB Description: Crystal structure of Escherichia coli 23S rRNA (A2030-N6)- methyltransferase RlmJ
PDB Compounds: (B:) Ribosomal RNA large subunit methyltransferase J

SCOPe Domain Sequences for d4blub_:

Sequence, based on SEQRES records: (download)

>d4blub_ c.66.1.0 (B:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
lsyrhsfhagnhadvlkhtvqsliieslkekdkpflyldthagagryqlgsehaertgey
legiariwqqddlpaeleayinvvkhfnrsgqlryypgspliarlllreqdslqltelhp
sdypllrsefqkdsrarvekadgfqqlkaklppvsrrglilidppyemktdyqavvsgia
egykrfatgiyalwypvvlrqqikrmihdleatgirkilqielavlpdsdrrgmtasgmi
vinppwkleqqmnnvlpwlhsklvpagtghatvswivpe

Sequence, based on observed residues (ATOM records): (download)

>d4blub_ c.66.1.0 (B:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
lsyrhsfhagnhadvlkhtvqsliieslkekdkpflyldthagagryqlgsertgeyleg
iariwqqddlpaeleayinvvkhfnrsgqlryypgspliarlllreqdslqltelhpsdy
pllrsefqkdsrarvekadgfqqlkaklppvsrrglilidppyemktdyqavvsgiaegy
krfatgiyalwypvvlrqqikrmihdleatgirkilqielavlpdsdrrgmtasgmivin
ppwkleqqmnnvlpwlhsklvpagtghatvswivpe

SCOPe Domain Coordinates for d4blub_:

Click to download the PDB-style file with coordinates for d4blub_.
(The format of our PDB-style files is described here.)

Timeline for d4blub_: