Lineage for d1ramb1 (1ram B:192-291)

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2021374Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2038571Superfamily b.1.18: E set domains [81296] (24 families) (S)
    "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies
  5. 2038572Family b.1.18.1: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain [81279] (8 proteins)
    subgroup of the larger IPT/TIG domain family
  6. 2038619Protein p65 subunit of NF-kappa B (NFKB), dimerization domain [49253] (3 species)
  7. 2038626Species Mouse (Mus musculus) [TaxId:10090] [49254] (13 PDB entries)
  8. 2038641Domain d1ramb1: 1ram B:192-291 [21940]
    Other proteins in same PDB: d1rama2, d1ramb2
    protein/DNA complex; complexed with dtt

Details for d1ramb1

PDB Entry: 1ram (more details), 2.7 Å

PDB Description: a novel dna recognition mode by nf-kb p65 homodimer
PDB Compounds: (B:) protein (transcription factor nf-kb p65)

SCOPe Domain Sequences for d1ramb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ramb1 b.1.18.1 (B:192-291) p65 subunit of NF-kappa B (NFKB), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}

SCOPe Domain Coordinates for d1ramb1:

Click to download the PDB-style file with coordinates for d1ramb1.
(The format of our PDB-style files is described here.)

Timeline for d1ramb1:

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