Lineage for d4ba2i2 (4ba2 I:66-152)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2049950Fold b.40: OB-fold [50198] (16 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 2051128Superfamily b.40.4: Nucleic acid-binding proteins [50249] (17 families) (S)
  5. 2051511Family b.40.4.5: Cold shock DNA-binding domain-like [50282] (31 protein domains)
    barrel, closed; n=5, S=8
  6. 2051932Protein S1-domain of exosome complex RNA-binding protein 1, ECR1 [159100] (3 species)
  7. 2051939Species Sulfolobus solfataricus [TaxId:2287] [159102] (4 PDB entries)
    Uniprot Q9UXC4 66-152
  8. 2051943Domain d4ba2i2: 4ba2 I:66-152 [219387]
    Other proteins in same PDB: d4ba2a1, d4ba2a2, d4ba2a3, d4ba2b1, d4ba2b2, d4ba2i1, d4ba2i3
    automated match to d2je6i1
    protein/RNA complex; complexed with 1pe, na, po4

Details for d4ba2i2

PDB Entry: 4ba2 (more details), 2.5 Å

PDB Description: Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate
PDB Compounds: (I:) Probable exosome complex RNA-binding protein 1

SCOPe Domain Sequences for d4ba2i2:

Sequence, based on SEQRES records: (download)

>d4ba2i2 b.40.4.5 (I:66-152) S1-domain of exosome complex RNA-binding protein 1, ECR1 {Sulfolobus solfataricus [TaxId: 2287]}
sfyypkindiviglvedveiygwvvdikapykaylpasnllgrsinvgedlrryldvgdy
viarienfdrsidpvlsvkgkdlgrvs

Sequence, based on observed residues (ATOM records): (download)

>d4ba2i2 b.40.4.5 (I:66-152) S1-domain of exosome complex RNA-binding protein 1, ECR1 {Sulfolobus solfataricus [TaxId: 2287]}
sfyypkindiviglvedveiygwvvdikapykaylpasnllgrsinvgedyldvgdyvia
rienfdrsidpvlsvkgkdlgrvs

SCOPe Domain Coordinates for d4ba2i2:

Click to download the PDB-style file with coordinates for d4ba2i2.
(The format of our PDB-style files is described here.)

Timeline for d4ba2i2: