Lineage for d1qrkb1 (1qrk B:10-190)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2032114Superfamily b.1.18: E set domains [81296] (24 families) (S)
    "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies
  5. 2032683Family b.1.18.9: Transglutaminase N-terminal domain [81289] (1 protein)
  6. 2032684Protein Transglutaminase N-terminal domain [49235] (4 species)
    elaborated with many loop insertions in the common fold
  7. 2032685Species Human (Homo sapiens), blood isozyme [TaxId:9606] [49236] (9 PDB entries)
    Coagulation factor XIII
  8. 2032697Domain d1qrkb1: 1qrk B:10-190 [21890]
    Other proteins in same PDB: d1qrka2, d1qrka3, d1qrka4, d1qrkb2, d1qrkb3, d1qrkb4
    complexed with sr

Details for d1qrkb1

PDB Entry: 1qrk (more details), 2.5 Å

PDB Description: human factor xiii with strontium bound in the ion site
PDB Compounds: (B:) protein (coagulation factor xiii)

SCOPe Domain Sequences for d1qrkb1:

Sequence, based on SEQRES records: (download)

>d1qrkb1 b.1.18.9 (B:10-190) Transglutaminase N-terminal domain {Human (Homo sapiens), blood isozyme [TaxId: 9606]}

Sequence, based on observed residues (ATOM records): (download)

>d1qrkb1 b.1.18.9 (B:10-190) Transglutaminase N-terminal domain {Human (Homo sapiens), blood isozyme [TaxId: 9606]}

SCOPe Domain Coordinates for d1qrkb1:

Click to download the PDB-style file with coordinates for d1qrkb1.
(The format of our PDB-style files is described here.)

Timeline for d1qrkb1: