SCOPe 2.03: Domain d4ahpd_: 4ahp D:

Lineage for d4ahpd_ (4ahp D:)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.0: automated matches [191319] (1 protein)
   not a true family

6. Protein automated matches [190115] (51 species)
   not a true protein

7. Species Staphylococcus aureus [TaxId:93061] [193178] (5 PDB entries)

8. Domain d4ahpd_: 4ahp D: [218877]
   automated match to d2ehhc_
   complexed with cl

Details for d4ahpd_

PDB Entry: 4ahp, 2.1 Å

PDB Description: Crystal Structure of Wild Type N-acetylneuraminic acid lyase from Staphylococcus aureus

PDB Compounds: (D:) n-acetylneuraminate lyase

SCOPe Domain Sequences for d4ahpd_:

Sequence, based on SEQRES records:

>d4ahpd_ c.1.10.0 (D:) automated matches {Staphylococcus aureus [TaxId: 93061]}
kdlkglyaallvpfdengqvneqglkqiaqnaieteeldglyvngssgenfllnteqkkq
vfkvakeavgdkvkliaqvgsldlneaielgkyatelgydalsavtpfyypftfeeirdy
yfdiieatqnnmiiyaipdltgvnisieqfselfnhekivgvkytapnffllerirkafp
dklilsgfdemlvqatisgvdgaigstynvngrrarkifdlarqgqiqeayqlqhdsndi
ietvlsmgiyptlkeilrhrgidaglpkrpfkpfneahrqtldqliakydl

Sequence, based on observed residues (ATOM records):

>d4ahpd_ c.1.10.0 (D:) automated matches {Staphylococcus aureus [TaxId: 93061]}
kdlkglyaallvpfdengqvneqglkqiaqnaieteeldglyvngssgenfllnteqkkq
vfkvakeavgdkvkliaqvgsldlneaielgkyatelgydalsavtpfyypftfeeirdy
yfdiieatqnnmiiyaisieqfselfnhekivgvkytapnffllerirkafpdklilsgf
demlvqatisgvdgaigstynvngrrarkifdlarqgqiqeayqlqhdsndiietvlsmg
iyptlkeilrhrgidaglpkrpfkpfneahrqtldqliakydl

Timeline for d4ahpd_:

• d4ahpd_ is new in SCOPe 2.03-stable
  
• d4ahpd_ appears in SCOPe 2.04
  
• d4ahpd_ appears in the current release, SCOPe 2.08