SCOPe 2.08: Domain d4ahpb1: 4ahp B:2-293

Lineage for d4ahpb1 (4ahp B:2-293)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.0: automated matches [191319] (1 protein)
   not a true family

6. Protein automated matches [190115] (94 species)
   not a true protein

7. Species Staphylococcus aureus [TaxId:93061] [193178] (7 PDB entries)

8. Domain d4ahpb1: 4ahp B:2-293 [218875]
   Other proteins in same PDB: d4ahpa2, d4ahpb2, d4ahpc2
   automated match to d2ehhc_
   complexed with cl

Details for d4ahpb1

PDB Entry: 4ahp, 2.1 Å

PDB Description: Crystal Structure of Wild Type N-acetylneuraminic acid lyase from Staphylococcus aureus

PDB Compounds: (B:) n-acetylneuraminate lyase

SCOPe Domain Sequences for d4ahpb1:

Sequence, based on SEQRES records:

>d4ahpb1 c.1.10.0 (B:2-293) automated matches {Staphylococcus aureus [TaxId: 93061]}
nkdlkglyaallvpfdengqvneqglkqiaqnaieteeldglyvngssgenfllnteqkk
qvfkvakeavgdkvkliaqvgsldlneaielgkyatelgydalsavtpfyypftfeeird
yyfdiieatqnnmiiyaipdltgvnisieqfselfnhekivgvkytapnffllerirkaf
pdklilsgfdemlvqatisgvdgaigstynvngrrarkifdlarqgqiqeayqlqhdsnd
iietvlsmgiyptlkeilrhrgidaglpkrpfkpfneahrqtldqliakydl

Sequence, based on observed residues (ATOM records):

>d4ahpb1 c.1.10.0 (B:2-293) automated matches {Staphylococcus aureus [TaxId: 93061]}
nkdlkglyaallvpfdengqvneqglkqiaqnaieteeldglyvngssgenfllnteqkk
qvfkvakeavgdkvkliaqvgsldlneaielgkyatelgydalsavtpfyypftfeeird
yyfdiieatqnnmiiyaisieqfselfnhekivgvkytapnffllerirkafpdklilsg
fdemlvqatisgvdgaigstynvngrrarkifdlarqgqiqeayqlqhdsndiietvlsm
giyptlkeilrhrgidaglpkrpfkpfneahrqtldqliakydl

Timeline for d4ahpb1:

• d4ahpb1 first appeared in SCOPe 2.03, called d4ahpb_
  
• d4ahpb1 appears in SCOPe 2.07