SCOPe 2.05: Domain d4ah9b_: 4ah9 B:

Lineage for d4ah9b_ (4ah9 B:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
   3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest

4. Superfamily c.55.3: Ribonuclease H-like [53098] (15 families)
   consists of one domain of this fold

5. Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (2 proteins)

6. Protein automated matches [190209] (4 species)
   not a true protein

7. Species Human immunodeficiency virus [TaxId:12721] [193331] (20 PDB entries)

8. Domain d4ah9b_: 4ah9 B: [218865]
   automated match to d2itga_
   complexed with 0mb, cl, edo, gol, so4, tam

Details for d4ah9b_

PDB Entry: 4ah9, 1.7 Å

PDB Description: Parallel screening of a low molecular weight compound library: do differences in methodology affect hit identification

PDB Compounds: (B:) integrase

SCOPe Domain Sequences for d4ah9b_:

Sequence, based on SEQRES records:

>d4ah9b_ c.55.3.2 (B:) automated matches {Human immunodeficiency virus [TaxId: 12721]}
sspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvht
dngsnftsttvkaacwwagikqedgipynpqsqgviesmnkelkkiigqvrdqaehlkta
vqmavfihnhkrkggiggysagerivdiiatdiq

Sequence, based on observed residues (ATOM records):

>d4ah9b_ c.55.3.2 (B:) automated matches {Human immunodeficiency virus [TaxId: 12721]}
sspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvht
dngsnftsttvkaacwwagikqedgipynpqsqgviesmnkelkkiigqvrdqaehlkta
vqmavfihnhkrkgysagerivdiiatdiq

Timeline for d4ah9b_:

• d4ah9b_ first appeared in SCOPe 2.03
  
• d4ah9b_ appears in SCOPe 2.04
  
• d4ah9b_ appears in SCOPe 2.06
  
• d4ah9b_ appears in the current release, SCOPe 2.08