SCOPe 2.08: Domain d1fiea1: 1fie A:9-190

Lineage for d1fiea1 (1fie A:9-190)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.18: E set domains [81296] (27 families)
   "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies

5. Family b.1.18.9: Transglutaminase N-terminal domain [81289] (1 protein)

6. Protein Transglutaminase N-terminal domain [49235] (4 species)
   elaborated with many loop insertions in the common fold

7. Species Human (Homo sapiens), blood isozyme [TaxId:9606] [49236] (9 PDB entries)
   Coagulation factor XIII

8. Domain d1fiea1: 1fie A:9-190 [21879]
   Other proteins in same PDB: d1fiea2, d1fiea3, d1fiea4, d1fieb2, d1fieb3, d1fieb4

Details for d1fiea1

PDB Entry: 1fie, 2.5 Å

PDB Description: recombinant human coagulation factor xiii

PDB Compounds: (A:) coagulation factor xiii

SCOPe Domain Sequences for d1fiea1:

Sequence, based on SEQRES records:

>d1fiea1 b.1.18.9 (A:9-190) Transglutaminase N-terminal domain {Human (Homo sapiens), blood isozyme [TaxId: 9606]}
ggrravppnnsnaaeddlptvelqgvvprgvnlqeflnvtsvhlfkerwdtnkvdhhtdk
yennklivrrgqsfyvqidfsrpydprrdlfrveyvigrypqenkgtyipvpivselqsg
kwgakivmredrsvrlsiqsspkcivgkfrmyvavwtpygvlrtsrnpetdtyilfnpwc
ed

Sequence, based on observed residues (ATOM records):

>d1fiea1 b.1.18.9 (A:9-190) Transglutaminase N-terminal domain {Human (Homo sapiens), blood isozyme [TaxId: 9606]}
ggrravppnnsnaaeddlptvflnvtsvhlfkerwdtnkvdhhtdkyennklivrrgqsf
yvqidfsrpydprrdlfrveyvigrypqenkgtyipvpivselqsgkwgakivmredrsv
rlsiqsspkcivgkfrmyvavwtpygvlrtsrnpetdtyilfnpwced

Timeline for d1fiea1:

• d1fiea1 first appeared (with stable ids) in SCOP 1.55
  
• d1fiea1 appears in SCOPe 2.07