SCOPe 2.07: Domain d3vq7a_: 3vq7 A:

Lineage for d3vq7a_ (3vq7 A:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
   3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest

4. Superfamily c.55.3: Ribonuclease H-like [53098] (16 families)
   consists of one domain of this fold

5. Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (2 proteins)

6. Protein Retroviral integrase, catalytic domain [53108] (4 species)

7. Species Human immunodeficiency virus type 1 [TaxId:11676] [53110] (73 PDB entries)

8. Domain d3vq7a_: 3vq7 A: [218025]
   automated match to d2itga_
   protein/DNA complex; complexed with cd, snu, so4, suc

Details for d3vq7a_

PDB Entry: 3vq7, 1.63 Å

PDB Description: hiv-1 in core domain in complex with 4-(1h-pyrrol-1-yl)aniline

PDB Compounds: (A:) Pol polyprotein

SCOPe Domain Sequences for d3vq7a_:

Sequence, based on SEQRES records:

>d3vq7a_ c.55.3.2 (A:) Retroviral integrase, catalytic domain {Human immunodeficiency virus type 1 [TaxId: 11676]}
spgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtd
ngsnftsttvkaacdwagikqedgipynpqsqgviesmnkelkkiigqvrdqaehlktav
qmavfihnhkrkggiggysagerivdiiatd

Sequence, based on observed residues (ATOM records):

>d3vq7a_ c.55.3.2 (A:) Retroviral integrase, catalytic domain {Human immunodeficiency virus type 1 [TaxId: 11676]}
spgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtd
ngsnftsttvkaacdwagikqedgipyviesmnkelkkiigqvrdqaehlktavqmavfi
hnhkrkggiggysagerivdiiatd

Timeline for d3vq7a_:

• d3vq7a_ first appeared in SCOPe 2.03
  
• d3vq7a_ appears in SCOPe 2.06
  
• d3vq7a_ appears in the current release, SCOPe 2.08