Lineage for d3vpda1 (3vpd A:1-88)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2106806Fold c.30: PreATP-grasp domain [52439] (1 superfamily)
    3 layers: a/b/a; parallel or mixed beta-sheet of 4 to 6 strands
    possible rudiment form of Rossmann-fold domain
  4. 2106807Superfamily c.30.1: PreATP-grasp domain [52440] (10 families) (S)
    precedes the ATP-grasp domain common to all superfamily members, can contain a substrate-binding function
  5. 2107110Family c.30.1.0: automated matches [227183] (1 protein)
    not a true family
  6. 2107111Protein automated matches [226903] (32 species)
    not a true protein
  7. 2107226Species Thermus thermophilus [TaxId:274] [226603] (4 PDB entries)
  8. 2107231Domain d3vpda1: 3vpd A:1-88 [217979]
    Other proteins in same PDB: d3vpda2, d3vpdb2
    automated match to d1uc8a1
    complexed with anp, bua, cit

Details for d3vpda1

PDB Entry: 3vpd (more details), 1.95 Å

PDB Description: LysX from Thermus thermophilus complexed with AMP-PNP
PDB Compounds: (A:) Ribosomal protein S6 modification protein

SCOPe Domain Sequences for d3vpda1:

Sequence; same for both SEQRES and ATOM records: (download)

>d3vpda1 c.30.1.0 (A:1-88) automated matches {Thermus thermophilus [TaxId: 274]}

SCOPe Domain Coordinates for d3vpda1:

Click to download the PDB-style file with coordinates for d3vpda1.
(The format of our PDB-style files is described here.)

Timeline for d3vpda1:

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