SCOPe 2.05: Domain d3vlmb1: 3vlm B:29-423

Lineage for d3vlmb1 (3vlm B:29-423)

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.93: Heme-dependent peroxidases [48112] (1 superfamily)
   multihelical; consists of two all-alpha domains

4. Superfamily a.93.1: Heme-dependent peroxidases [48113] (4 families)

5. Family a.93.1.0: automated matches [191605] (1 protein)
   not a true family

6. Protein automated matches [191104] (10 species)
   not a true protein

7. Species Haloarcula marismortui [TaxId:272569] [226809] (7 PDB entries)

8. Domain d3vlmb1: 3vlm B:29-423 [217936]
   automated match to d1ub2a1
   complexed with hem

Details for d3vlmb1

PDB Entry: 3vlm, 2.33 Å

PDB Description: Crystal Structure Analysis of the Met244Ala Variant of KatG from Haloarcula marismortui

PDB Compounds: (B:) Catalase-peroxidase 2

SCOPe Domain Sequences for d3vlmb1:

Sequence, based on SEQRES records:

>d3vlmb1 a.93.1.0 (B:29-423) automated matches {Haloarcula marismortui [TaxId: 272569]}
sklnleildqnardvgpveddfdyaeefqkldleavksdleelmtssqdwwpadyghygp
lfirmawhsagtyrtadgrggaaggrqrfapinswpdnanldkarrlllpikqkygqkis
wadlmilagnvaiesmgfktfgyaggredafeedkavnwgpedefetqerfdepgeiqeg
lgasvmgliyvnpegpdgnpdpeasaknirqtfdraamndketaaliagghtfgkvhgad
dpeenlgpepeaapieqqglgwqnkngnskggemitsgiegpwtqsptewdmgyinnlld
yewepekgpggawqwapkseelknsvpdahdpdekqtpmmlttdialkrdpdyrevmetf
qenpmefgmnfakawyklthrdmgpperflgpevp

Sequence, based on observed residues (ATOM records):

>d3vlmb1 a.93.1.0 (B:29-423) automated matches {Haloarcula marismortui [TaxId: 272569]}
sklnleildqnardvgpvedyaeefqkldleavksdleelmtssqdwwpadyghygplfi
rmawhsagtyrtadgrggaaggrqrfapinswpdnanldkarrlllpikqkygqkiswad
lmilagnvaiesmgfktfgyaggredafeedkavnwgliyvnpegpdgnpdpeasaknir
qtfdraamndketaaliagghtfgkvhgaddpeenlgpepeaapieqqglgwqmitsgie
gpwtqsptewdmgyinnlldyewepekgpggawqwapkseelknsvpdahdpdekqtpmm
lttdialkrdpdyrevmetfqenpmefgmnfakawyklthrdmgpperflgpevp

Timeline for d3vlmb1:

• d3vlmb1 first appeared in SCOPe 2.03
  
• d3vlmb1 appears in SCOPe 2.04
  
• d3vlmb1 appears in SCOPe 2.06
  
• d3vlmb1 appears in the current release, SCOPe 2.08