Lineage for d3vipa_ (3vip A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2829818Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2832343Family c.1.8.0: automated matches [191314] (1 protein)
    not a true family
  6. 2832344Protein automated matches [190075] (132 species)
    not a true protein
  7. 2832875Species Neotermes koshunensis [TaxId:60586] [189411] (13 PDB entries)
  8. 2832883Domain d3vipa_: 3vip A: [217850]
    automated match to d3ai0a_
    complexed with cl, goi, gol, na, onb

Details for d3vipa_

PDB Entry: 3vip (more details), 1.28 Å

PDB Description: Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with a new glucopyranosidic product
PDB Compounds: (A:) Beta-glucosidase

SCOPe Domain Sequences for d3vipa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3vipa_ c.1.8.0 (A:) automated matches {Neotermes koshunensis [TaxId: 60586]}
tvytfpdefklgaatasyqiegawdengkgpniwdtlthehpdyvvdgatgdiaddsyhl
ykedvkilkelgaqvyrfsiswarvlpeghdnivnqdgidyynnlinellangiepmvtm
yhwdlpqalqdlggwpnlvlakysenyarvlfknfgdrvklwltfndpltfmdgyaseig
mapsintpgigdylaahtvihahariyhlydqefraeqggkvgislninwcepatnsaed
rascenyqqfnlglyahpifteegdypavlkdrvsrnsadegytdsrlpqftaeeveyir
gthdflginfytallgksgvegyepsryrdsgviltqdaawpisasswlkvvpwgfrkel
nwikneynnppvfitengfsdygglndtgrvhyytehlkemlkaihedgvnvigytawsl
mdnfewlrgysekfgiyavdfedparpripkesakvlaeimntrkiperfrd

SCOPe Domain Coordinates for d3vipa_:

Click to download the PDB-style file with coordinates for d3vipa_.
(The format of our PDB-style files is described here.)

Timeline for d3vipa_: