Lineage for d3t1dc_ (3t1d C:)

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1799770Fold b.60: Lipocalins [50813] (1 superfamily)
    barrel, closed or opened; n=8, S=12; meander
  4. 1799771Superfamily b.60.1: Lipocalins [50814] (10 families) (S)
    bind hydrophobic ligands in their interior
  5. 1799772Family b.60.1.1: Retinol binding protein-like [50815] (22 proteins)
    barrel, closed; n=8, S=12, meander
  6. 1799930Protein Neutrophil gelatinase-associated lipocalin (NGAL) [50835] (1 species)
  7. 1799931Species Human (Homo sapiens) [TaxId:9606] [50836] (34 PDB entries)
  8. 1799935Domain d3t1dc_: 3t1d C: [216641]
    automated match to d4iawa_
    complexed with cl, dbh, dbs, gol, td1, unx; mutant

Details for d3t1dc_

PDB Entry: 3t1d (more details), 2.3 Å

PDB Description: the mutant structure of human siderocalin w79a, r81a, y106f bound to enterobactin
PDB Compounds: (C:) Neutrophil gelatinase-associated lipocalin

SCOPe Domain Sequences for d3t1dc_:

Sequence, based on SEQRES records: (download)

>d3t1dc_ b.60.1.1 (C:) Neutrophil gelatinase-associated lipocalin (NGAL) {Human (Homo sapiens) [TaxId: 9606]}
tsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelkedks
ynvtsvlfrkkkcdyaiatfvpgsqpgeftlgniksypgltsflvrvvstnynqhamvff
kkvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcid

Sequence, based on observed residues (ATOM records): (download)

>d3t1dc_ b.60.1.1 (C:) Neutrophil gelatinase-associated lipocalin (NGAL) {Human (Homo sapiens) [TaxId: 9606]}
tsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredpqkmyatiyelkedksyn
vtsvlfrkkkcdyaiatfvpgsqpgeftlgniksypgltsflvrvvstnynqhamvffkk
vsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcid

SCOPe Domain Coordinates for d3t1dc_:

Click to download the PDB-style file with coordinates for d3t1dc_.
(The format of our PDB-style files is described here.)

Timeline for d3t1dc_: