Lineage for d3srkb1 (3srk B:0-87,B:187-357)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2088020Superfamily c.1.12: Phosphoenolpyruvate/pyruvate domain [51621] (8 families) (S)
  5. 2088021Family c.1.12.1: Pyruvate kinase [51622] (1 protein)
  6. 2088022Protein Pyruvate kinase, N-terminal domain [51623] (6 species)
    this domain is interrupted by an all-beta domain
    C-terminal domain is alpha/beta
  7. 2088122Species Trypanosome (Leishmania mexicana) [TaxId:5665] [51626] (11 PDB entries)
  8. 2088160Domain d3srkb1: 3srk B:0-87,B:187-357 [216525]
    Other proteins in same PDB: d3srka2, d3srka3, d3srkb2, d3srkb3
    automated match to d1pkla2
    complexed with k, lsa, ptk

Details for d3srkb1

PDB Entry: 3srk (more details), 2.65 Å

PDB Description: A new class of suicide inhibitor blocks nucleotide binding to pyruvate kinase
PDB Compounds: (B:) pyruvate kinase

SCOPe Domain Sequences for d3srkb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d3srkb1 c.1.12.1 (B:0-87,B:187-357) Pyruvate kinase, N-terminal domain {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

SCOPe Domain Coordinates for d3srkb1:

Click to download the PDB-style file with coordinates for d3srkb1.
(The format of our PDB-style files is described here.)

Timeline for d3srkb1: