SCOPe 2.05: Domain d3sm0a_: 3sm0 A:

Lineage for d3sm0a_ (3sm0 A:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family)

5. Family c.1.20.1: tRNA-guanine transglycosylase [51714] (2 proteins)

6. Protein Queosine tRNA-guanine transglycosylase [51715] (3 species)
   contains zinc-binding subdomain

7. Species Zymomonas mobilis [TaxId:542] [51716] (87 PDB entries)
   Uniprot P28720

8. Domain d3sm0a_: 3sm0 A: [216481]
   automated match to d1r5ya_
   protein/RNA complex; complexed with aek, gol, zn

Details for d3sm0a_

PDB Entry: 3sm0, 1.57 Å

PDB Description: tRNA-Guanine Transglycosylase in complex with lin-Benzohypoxanthine Inhibitor

PDB Compounds: (A:) Queuine tRNA-ribosyltransferase

SCOPe Domain Sequences for d3sm0a_:

Sequence, based on SEQRES records:

>d3sm0a_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilgn
tyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfkshldg
srhmlspersieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsrk
eqaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpm
lpddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsed
lkpldsechcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegrf
sqfaqdfraryf

Sequence, based on observed residues (ATOM records):

>d3sm0a_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilgn
tyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmsltkqseegvtfksrhmlspe
rsieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsrkeqaenaal
fgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpmlpddkphy
lmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsedlkpldsec
hcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegrfsqfaqdfr
aryf

Timeline for d3sm0a_:

• d3sm0a_ first appeared in SCOPe 2.03
  
• d3sm0a_ appears in SCOPe 2.04
  
• d3sm0a_ appears in SCOPe 2.06
  
• d3sm0a_ appears in the current release, SCOPe 2.08