SCOPe 2.06: Domain d1d5ma1: 1d5m A:82-181

Lineage for d1d5ma1 (1d5m A:82-181)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)

6. Protein Class II MHC alpha chain, C-terminal domain [88618] (6 species)

7. Species Human (Homo sapiens), HLA-DR group [TaxId:9606] [88621] (37 PDB entries)
   Uniprot P01903 28-207
   probably orthologous to the mouse I-E group

8. Domain d1d5ma1: 1d5m A:82-181 [21617]
   Other proteins in same PDB: d1d5ma2, d1d5mb1, d1d5mb2, d1d5mc1, d1d5mc2
   complexed with nag

Details for d1d5ma1

PDB Entry: 1d5m, 2 Å

PDB Description: x-ray crystal structure of hla-dr4 complexed with peptide and seb

PDB Compounds: (A:) hla class II histocompatibility antigen

SCOPe Domain Sequences for d1d5ma1:

Sequence; same for both SEQRES and ATOM records:

>d1d5ma1 b.1.1.2 (A:82-181) Class II MHC alpha chain, C-terminal domain {Human (Homo sapiens), HLA-DR group [TaxId: 9606]}
itnvppevtvltnspvelrepnvlicfidkftppvvnvtwlrngkpvttgvsetvflpre
dhlfrkfhylpflpstedvydcrvehwgldepllkhwefd

Timeline for d1d5ma1:

• d1d5ma1 first appeared (with stable ids) in SCOP 1.55
  
• d1d5ma1 appears in SCOPe 2.05
  
• d1d5ma1 appears in SCOPe 2.07
  
• d1d5ma1 appears in the current release, SCOPe 2.08