SCOPe 2.03: Domain d3rr4a_: 3rr4 A:

Lineage for d3rr4a_ (3rr4 A:)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family)

5. Family c.1.20.1: tRNA-guanine transglycosylase [51714] (3 proteins)

6. Protein Queosine tRNA-guanine transglycosylase [51715] (3 species)
   contains zinc-binding subdomain

7. Species Zymomonas mobilis [TaxId:542] [51716] (57 PDB entries)
   Uniprot P28720

8. Domain d3rr4a_: 3rr4 A: [216006]
   automated match to d1r5ya_
   protein/RNA complex; complexed with gol, hrd, zn

Details for d3rr4a_

PDB Entry: 3rr4, 1.68 Å

PDB Description: trna-guanine transglycosylase in complex with n-methyl-lin- benzoguanine inhibitor

PDB Compounds: (A:) Queuine tRNA-ribosyltransferase

SCOPe Domain Sequences for d3rr4a_:

Sequence, based on SEQRES records:

>d3rr4a_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilgn
tyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfkshldg
srhmlspersieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsrk
eqaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpm
lpddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsed
lkpldsechcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegrf
sqfaqdfraryf

Sequence, based on observed residues (ATOM records):

>d3rr4a_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilgn
tyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslsltkqseegvtfkshsrhm
lspersieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsrkeqae
naalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpmlpdd
kphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsedlkpl
dsechcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegrfsqfa
qdfraryf

Timeline for d3rr4a_:

• d3rr4a_ is new in SCOPe 2.03-stable
  
• d3rr4a_ appears in SCOPe 2.04
  
• d3rr4a_ appears in the current release, SCOPe 2.08