SCOPe 2.06: Domain d3rq5a_: 3rq5 A:

Lineage for d3rq5a_ (3rq5 A:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.72: Ribokinase-like [53612] (3 superfamilies)
   core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
   potential superfamily: members of this fold have similar functions but different ATP-binding sites

4. Superfamily c.72.1: Ribokinase-like [53613] (6 families)
   has extra strand located between strands 2 and 3

5. Family c.72.1.4: YjeF C-terminal domain-like [75292] (3 proteins)
   automatically mapped to Pfam PF01256

6. Protein automated matches [193682] (1 species)
   not a true protein

7. Species Bacillus subtilis [TaxId:1423] [193683] (9 PDB entries)

8. Domain d3rq5a_: 3rq5 A: [215986]
   automated match to d3rpha_
   complexed with coa, gol

Details for d3rq5a_

PDB Entry: 3rq5, 1.7 Å

PDB Description: crystal structure of adp/atp-dependent nad(p)h-hydrate dehydratase from bacillus subtilis co-crystallized with atp/mg2+ and soaked with coa

PDB Compounds: (A:) ADP/ATP-dependent NAD(P)H-hydrate dehydratase

SCOPe Domain Sequences for d3rq5a_:

Sequence, based on SEQRES records:

>d3rq5a_ c.72.1.4 (A:) automated matches {Bacillus subtilis [TaxId: 1423]}
mnvpfwteehvratlperdaeshkgtygtalllagsddmpgaallaglgamrsglgklvi
gtsenviplivpvlpeatywrdgwkkaadaqleetyraiaigpglpqtesvqqavdhvlt
adcpvildagalakrtypkregpviltphpgeffrmtgvpvnelqkkraeyakewaaqlq
tvivlkgnqtviafpdgdcwlnptgngalakggtgdtltgmilgmlcchedpkhavlnav
ylhgacaelwtdehsahtllahelsdilprvwkrfe

Sequence, based on observed residues (ATOM records):

>d3rq5a_ c.72.1.4 (A:) automated matches {Bacillus subtilis [TaxId: 1423]}
mnvpfwteehvratlperdtygtalllagsddmpgaallaglgamrsglgklvigtsenv
iplivpvlpeatywrdgwkkaadaqleetyraiaigpglpqtesvqqavdhvltadcpvi
ldagalakrtypkregpviltphpgeffrmtgvpvnelqkkraeyakewaaqlqtvivlk
gnqtviafpdgdcwlnptgngalakggtgdtltgmilgmlcchedpkhavlnavylhgac
aelwtdehsahtllahelsdilprvwkrfe

Timeline for d3rq5a_:

• d3rq5a_ first appeared in SCOPe 2.03
  
• d3rq5a_ appears in SCOPe 2.05
  
• d3rq5a_ appears in SCOPe 2.07
  
• d3rq5a_ appears in the current release, SCOPe 2.08