Lineage for d1hdma1 (1hdm A:94-196)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2020524Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 protein domains)
  6. 2021990Protein Class II MHC alpha chain, C-terminal domain [88618] (6 species)
  7. 2021991Species Human (Homo sapiens), HLA-DM [TaxId:9606] [88619] (1 PDB entry)
    probably orthologous to the mouse H2-DM
  8. 2021992Domain d1hdma1: 1hdm A:94-196 [21583]
    Other proteins in same PDB: d1hdma2, d1hdmb1, d1hdmb2

Details for d1hdma1

PDB Entry: 1hdm (more details), 2.5 Å

PDB Description: histocompatibility antigen hla-dm
PDB Compounds: (A:) protein (class II histocompatibility antigen, m alpha chain)

SCOPe Domain Sequences for d1hdma1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1hdma1 b.1.1.2 (A:94-196) Class II MHC alpha chain, C-terminal domain {Human (Homo sapiens), HLA-DM [TaxId: 9606]}

SCOPe Domain Coordinates for d1hdma1:

Click to download the PDB-style file with coordinates for d1hdma1.
(The format of our PDB-style files is described here.)

Timeline for d1hdma1:

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Domains from same chain:
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