SCOPe 2.08: Domain d3q1ka2: 3q1k A:140-363

Lineage for d3q1ka2 (3q1k A:140-363)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)
   Consists of two subdomains with different alpha+beta folds
   shares functional and structural similarities with the PIPK and protein kinase superfamilies

4. Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families)

5. Family d.142.1.0: automated matches [227184] (1 protein)
   not a true family

6. Protein automated matches [226904] (39 species)
   not a true protein

7. Species Salmonella enterica [TaxId:90371] [226057] (1 PDB entry)

8. Domain d3q1ka2: 3q1k A:140-363 [215022]
   Other proteins in same PDB: d3q1ka1, d3q1kb1, d3q1kc1, d3q1kd1
   automated match to d1ehib2
   complexed with adp, fmt, gol, mg, so4

Details for d3q1ka2

PDB Entry: 3q1k, 2.2 Å

PDB Description: The Crystal Structure of the D-alanyl-alanine Synthetase A from Salmonella enterica Typhimurium Complexed with ADP

PDB Compounds: (A:) D-alanine--D-alanine ligase A

SCOPe Domain Sequences for d3q1ka2:

Sequence, based on SEQRES records:

>d3q1ka2 d.142.1.0 (A:140-363) automated matches {Salmonella enterica [TaxId: 90371]}
dkdvakrllrdaglniapfitltrtnrhafsfaevesrlglplfvkpanqgssvgvskva
neaqyqqavalafefdhkvvveqgikgreiecavlgndnpqastcgeivlnsefyaydtk
yiddngaqvvvpaqipsevndkiraiaiqayqtlgcagmarvdvfltadnevvineintl
pgftnismypklwqasglgytdlisrlielalerhtannalktt

Sequence, based on observed residues (ATOM records):

>d3q1ka2 d.142.1.0 (A:140-363) automated matches {Salmonella enterica [TaxId: 90371]}
dkdvakrllrdaglniapfitltrtnrhafsfaevesrlglplfvkpanqgssvgvskva
neaqyqqavalafefdhkvvveqgikgreiecavlgndnpqastcgeivlnsefkyiddn
gaqvvvpaqipsevndkiraiaiqayqtlgcagmarvdvfltadnevvineintlpgftn
ismypklwqasglgytdlisrlielalerhtannalktt

Timeline for d3q1ka2:

• d3q1ka2 first appeared in SCOPe 2.03
  
• d3q1ka2 appears in SCOPe 2.07