SCOPe 2.05: Domain d3pgvd_: 3pgv D:

Lineage for d3pgvd_ (3pgv D:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.108: HAD-like [56783] (1 superfamily)
   3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456

4. Superfamily c.108.1: HAD-like [56784] (26 families)
   usually contains an insertion (sub)domain after strand 1

5. Family c.108.1.0: automated matches [191369] (1 protein)
   not a true family

6. Protein automated matches [190447] (49 species)
   not a true protein

7. Species Klebsiella pneumoniae [TaxId:272620] [226041] (1 PDB entry)

8. Domain d3pgvd_: 3pgv D: [214779]
   automated match to d1nf2a_
   complexed with ca, edo, epe, gol

Details for d3pgvd_

PDB Entry: 3pgv, 2.39 Å

PDB Description: Crystal structure of a haloacid dehalogenase-like hydrolase (KPN_04322) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578 at 2.39 A resolution

PDB Compounds: (D:) Haloacid dehalogenase-like hydrolase

SCOPe Domain Sequences for d3pgvd_:

Sequence, based on SEQRES records:

>d3pgvd_ c.108.1.0 (D:) automated matches {Klebsiella pneumoniae [TaxId: 272620]}
myqvvasdldgtllspdhfltpyaketlklltarginfvfatgrhyidvgqirdnlgirs
ymitsngarvhdsdgqqifahnldrdiaadlfeivrndpkivtnvyredewymnrhrpee
mrffkeavfnyklyepgeldpqgiskvfftcedhehllpleqamnarwgdrvnvsfstlt
clevmaggvskghaleavakmlgytlsdciafgdgmndaemlsmagkgcimanahqrlkd
lhpelevigsnaddavprylrklyld

Sequence, based on observed residues (ATOM records):

>d3pgvd_ c.108.1.0 (D:) automated matches {Klebsiella pneumoniae [TaxId: 272620]}
myqvvasdldgtllspdhfltpyaketlklltarginfvfatgrhyidvgqirdnlgirs
ymitsngarvhdsdgqqifahnldrdiaadlfeivrndpkivtnvyredewymnrhrpvf
nyklyepgeldpqgiskvfftcedhehllpleqamnarwgdrvnvsfstltclevmaggv
skghaleavakmlgytlsdciafgdgmndaemlsmagkgcimanahqrlkdlhpelevig
snaddavprylrklyld

Timeline for d3pgvd_:

• d3pgvd_ first appeared in SCOPe 2.03
  
• d3pgvd_ appears in SCOPe 2.04
  
• d3pgvd_ appears in SCOPe 2.06
  
• d3pgvd_ appears in the current release, SCOPe 2.08