SCOPe 2.03: Domain d3pgfa_: 3pgf A:

Lineage for d3pgfa_ (3pgf A:)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
   Similar in architecture to the superfamily I but partly differs in topology

5. Family c.94.1.1: Phosphate binding protein-like [53851] (41 proteins)

6. Protein D-maltodextrin-binding protein, MBP [53862] (5 species)
   contains a few additional helices in the C-terminal extension; homologous to thiaminase I

7. Species Escherichia coli [TaxId:562] [53863] (55 PDB entries)
   Uniprot P02928

8. Domain d3pgfa_: 3pgf A: [214767]
   Other proteins in same PDB: d3pgfl1, d3pgfl2
   automated match to d1iuda_
   complexed with gol, imd

Details for d3pgfa_

PDB Entry: 3pgf, 2.1 Å

PDB Description: crystal structure of maltose bound mbp with a conformationally specific synthetic antigen binder (sab)

PDB Compounds: (A:) Maltose-binding periplasmic protein

SCOPe Domain Sequences for d3pgfa_:

Sequence, based on SEQRES records:

>d3pgfa_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Escherichia coli [TaxId: 562]}
kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdii
fwahdrfggyaqsgllaeitpdkafqdklypftwdavryngkliaypiavealsliynkd
llpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyengkydikd
vgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtskv
nygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplg
avalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdea
lkdaqtn

Sequence, based on observed residues (ATOM records):

>d3pgfa_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Escherichia coli [TaxId: 562]}
kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdii
fwahdrfggyaqsgllaeitpdkafqdklypftwdavryngkliaypiavealsliynkd
llpnppktweeipaldkelkakgksalmfnlqepyftwpliaadgkydikdvgvdnagak
agltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtskvnygvtvlpt
fkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyee
elakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdealkdaqtn

Timeline for d3pgfa_:

• d3pgfa_ is new in SCOPe 2.03-stable
  
• d3pgfa_ appears in SCOPe 2.04
  
• d3pgfa_ appears in the current release, SCOPe 2.08