Lineage for d3p41a1 (3p41 A:3-293)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2010547Fold a.128: Terpenoid synthases [48575] (1 superfamily)
    multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers
  4. 2010548Superfamily a.128.1: Terpenoid synthases [48576] (6 families) (S)
    duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J
  5. 2010904Family a.128.1.0: automated matches [196408] (1 protein)
    not a true family
  6. 2010905Protein automated matches [196409] (36 species)
    not a true protein
  7. 2010990Species Pseudomonas fluorescens [TaxId:220664] [225836] (3 PDB entries)
  8. 2010993Domain d3p41a1: 3p41 A:3-293 [214654]
    Other proteins in same PDB: d3p41a2
    automated match to d3p8ra_
    complexed with cl, dma, gol, mg, pop

Details for d3p41a1

PDB Entry: 3p41 (more details), 1.76 Å

PDB Description: crystal structure of polyprenyl synthetase from pseudomonas fluorescens pf-5 complexed with magnesium and isoprenyl pyrophosphate
PDB Compounds: (A:) Geranyltranstransferase

SCOPe Domain Sequences for d3p41a1:

Sequence, based on SEQRES records: (download)

>d3p41a1 a.128.1.0 (A:3-293) automated matches {Pseudomonas fluorescens [TaxId: 220664]}
tayqassqarvdaamhtlftapspelarlyeamrysvmnggkrvrpllayaacealggkp
eqangaacavelihayslvhddlpamddddlrrgqptthkafdeacailagdglqslafs
alldpalsdasaeirlrmvttlaqaagpagmvggqaidlgsvglkldqqaleymhrhktg
alieasvilgalasgraekgelkalqtyaqaiglafqvqddildvesdtatlgkrqgadi
ardkptypallglaaakeyalelrdqalhalrpfdaaaeplrelaryiver

Sequence, based on observed residues (ATOM records): (download)

>d3p41a1 a.128.1.0 (A:3-293) automated matches {Pseudomonas fluorescens [TaxId: 220664]}
tayqassqarvdaamhtlftapspelarlyeamrysvmnggkrvrpllayaacealggkp
eqangaacavelihayslvhddlpamddddlrrgqptthkafdeacailagdglqslafs
alldpalsdasaeirlrmvttlaqaagpagmvggqaidlgsvglkldqqaleymhrhktg
alieasvilgalasgraekgelkalqtyaqaiglafqvqddildvesdtatptypallgl
aaakeyalelrdqalhalrpfdaaaeplrelaryiver

SCOPe Domain Coordinates for d3p41a1:

Click to download the PDB-style file with coordinates for d3p41a1.
(The format of our PDB-style files is described here.)

Timeline for d3p41a1:

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Domains from same chain:
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d3p41a2