SCOPe 2.04: Domain d3ojua2: 3oju A:423-832

Lineage for d3ojua2 (3oju A:423-832)

1. Root: SCOPe 2.04

2. Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)

3. Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
   divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members

4. Superfamily e.8.1: DNA/RNA polymerases [56672] (7 families)
   "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain

5. Family e.8.1.1: DNA polymerase I [56673] (5 proteins)

6. Protein DNA polymerase I (Klenow fragment) [56674] (3 species)

7. Species Thermus aquaticus [TaxId:271] [56676] (24 PDB entries)

8. Domain d3ojua2: 3oju A:423-832 [214398]
   Other proteins in same PDB: d3ojua1
   automated match to d1jxea2
   protein/DNA complex; complexed with gol, mg, pge, ssj

Details for d3ojua2

PDB Entry: 3oju, 2 Å

PDB Description: snapshot of the large fragment of dna polymerase i from thermus aquaticus processing c5 modified thymidies

PDB Compounds: (A:) DNA polymerase I, thermostable

SCOPe Domain Sequences for d3ojua2:

Sequence; same for both SEQRES and ATOM records:

>d3ojua2 e.8.1.1 (A:423-832) DNA polymerase I (Klenow fragment) {Thermus aquaticus [TaxId: 271]}
eerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpf
nlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltklk
styidplpdlihprtgrlhtrfnqtatatgrlsssdpnlqnipvrtplgqrirrafiaee
gwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraa
ktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvet
lfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllq
vhdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake

Timeline for d3ojua2:

• d3ojua2 first appeared in SCOPe 2.03
  
• d3ojua2 appears in SCOPe 2.05
  
• d3ojua2 appears in the current release, SCOPe 2.08