SCOPe 2.05: Domain d3ns8b_: 3ns8 B:

Lineage for d3ns8b_ (3ns8 B:)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (9 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Ubiquitin [54238] (7 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54239] (149 PDB entries)
   Uniprot P62988
   identical sequence in many other species

8. Domain d3ns8b_: 3ns8 B: [214038]
   automated match to d1ogwa_
   complexed with epe, gol

Details for d3ns8b_

PDB Entry: 3ns8, 1.71 Å

PDB Description: Crystal structure of an open conformation of Lys48-linked diubiquitin at pH 7.5

PDB Compounds: (B:) Ubiquitin

SCOPe Domain Sequences for d3ns8b_:

Sequence; same for both SEQRES and ATOM records:

>d3ns8b_ d.15.1.1 (B:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrl

Timeline for d3ns8b_:

• d3ns8b_ first appeared in SCOPe 2.03
  
• d3ns8b_ appears in SCOPe 2.04
  
• d3ns8b_ appears in SCOPe 2.06
  
• d3ns8b_ appears in the current release, SCOPe 2.08