SCOPe 2.07: Domain d3nema2: 3nem A:103-316,A:317-438

Lineage for d3nema2 (3nem A:103-316,A:317-438)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
   contains large mixed beta-sheet

4. Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (5 families)

5. Family d.104.1.0: automated matches [227172] (1 protein)
   not a true family

6. Protein automated matches [226887] (24 species)
   not a true protein

7. Species Thermococcus kodakarensis [TaxId:311400] [226766] (3 PDB entries)

8. Domain d3nema2: 3nem A:103-316,A:317-438 [213900]
   Other proteins in same PDB: d3nema1, d3nemb1
   automated match to d1c0aa3
   protein/RNA complex; complexed with amo, atp, mg

Details for d3nema2

PDB Entry: 3nem, 1.89 Å

PDB Description: Aspartyl-tRNA synthetase complexed with aspartyl adenylate

PDB Compounds: (A:) ASPARTYL-tRNA SYNTHETASE

SCOPe Domain Sequences for d3nema2:

Sequence; same for both SEQRES and ATOM records:

>d3nema2 d.104.1.0 (A:103-316,A:317-438) automated matches {Thermococcus kodakarensis [TaxId: 311400]}
tplpldptgkvkaeldtrldnrfmdlrrpevmaifkirssvfkavrdffhengfieihtp
kiiatateggtelfpmkyfeedaflaqspqlykqimmasgldrvyeiapifraeehnttr
hlneawsidsemafiedeeevmsflerlvahainyvrehnakeldilnfeleepklpfpr
vsydkaleilgdlgkeipwgedidtegerllgkyXmmenenaplyflyqypseakpfyim
kydnkpeicrafdleyrgveissggqrehrhdilveqikekglnpesfefylkafrygmp
phggfglgaerlikqmldlpnirevilfprdrrrltp

Timeline for d3nema2:

• d3nema2 first appeared in SCOPe 2.03
  
• d3nema2 appears in SCOPe 2.06
  
• d3nema2 appears in the current release, SCOPe 2.08