SCOPe 2.04: Domain d3nelb2: 3nel B:103-316,B:317-438

Lineage for d3nelb2 (3nel B:103-316,B:317-438)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
   contains large mixed beta-sheet

4. Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (5 families)

5. Family d.104.1.0: automated matches [227172] (1 protein)
   not a true family

6. Protein automated matches [226887] (8 species)
   not a true protein

7. Species Thermococcus kodakarensis [TaxId:311400] [226766] (3 PDB entries)

8. Domain d3nelb2: 3nel B:103-316,B:317-438 [213898]
   Other proteins in same PDB: d3nela1, d3nelb1
   automated match to d1c0aa3
   protein/RNA complex; complexed with asp

Details for d3nelb2

PDB Entry: 3nel, 1.95 Å

PDB Description: Aspartyl-tRNA synthetase complexed with aspartic acid

PDB Compounds: (B:) ASPARTYL-tRNA SYNTHETASE

SCOPe Domain Sequences for d3nelb2:

Sequence; same for both SEQRES and ATOM records:

>d3nelb2 d.104.1.0 (B:103-316,B:317-438) automated matches {Thermococcus kodakarensis [TaxId: 311400]}
tplpldptgkvkaeldtrldnrfmdlrrpevmaifkirssvfkavrdffhengfieihtp
kiiatateggtelfpmkyfeedaflaqspqlykqimmasgldrvyeiapifraeehnttr
hlneawsidsemafiedeeevmsflerlvahainyvrehnakeldilnfeleepklpfpr
vsydkaleilgdlgkeipwgedidtegerllgkyXmmenenaplyflyqypseakpfyim
kydnkpeicrafdleyrgveissggqrehrhdilveqikekglnpesfefylkafrygmp
phggfglgaerlikqmldlpnirevilfprdrrrltp

Timeline for d3nelb2:

• d3nelb2 first appeared in SCOPe 2.03
  
• d3nelb2 appears in SCOPe 2.05
  
• d3nelb2 appears in the current release, SCOPe 2.08