SCOPe 2.08: Domain d3mksd2: 3mks D:370-744

Lineage for d3mksd2 (3mks D:370-744)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.69: 7-bladed beta-propeller [50964] (15 superfamilies)
   consists of seven 4-stranded beta-sheet motifs; meander

4. Superfamily b.69.4: WD40 repeat-like [50978] (4 families)
   also contains 8-bladed propellers

5. Family b.69.4.1: WD40-repeat [50979] (17 proteins)
   this is a repeat family; one repeat unit is 1tyq C:201-243 found in domain

6. Protein Cdc4 propeller domain [82169] (1 species)
   8-bladed beta-propeller without perfect 8-fold symmetry

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [82170] (2 PDB entries)

8. Domain d3mksd2: 3mks D:370-744 [213315]
   Other proteins in same PDB: d3mksa1, d3mksa2, d3mksb1, d3mksc1, d3mksc2, d3mksd1
   automated match to d1nexb2
   complexed with c1c, gol, so4
   applies to all domains of a family if the common domain is composed of a different number of small repeating units

Details for d3mksd2

PDB Entry: 3mks, 2.6 Å

PDB Description: crystal structure of yeast cdc4/skp1 in complex with an allosteric inhibitor scf-i2

PDB Compounds: (D:) Cell division control protein 4

SCOPe Domain Sequences for d3mksd2:

Sequence, based on SEQRES records:

>d3mksd2 b.69.4.1 (D:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
fvpqrttlrghmtsvitclqfednyvitgaddkmirvydsinkkfllqlsghdggvwalk
yahggilvsgstdrtvrvwdikkgccthvfeghnstvrcldiveyknikyivtgsrdntl
hvwklpkessvpdhgeehdyplvfhtpeenpyfvgvlrghmasvrtvsghgnivvsgsyd
ntlivwdvaqmkclyilsghtdriystiydherkrcisasmdttiriwdlengelmytlq
ghtalvgllrlsdkflvsaaadgsirgwdandysrkfsyhhtnlsaittfyvsdnilvsg
senqfniynlrsgklvhanilkdadqiwsvnfkgktlvaavekdgqsfleildfs

Sequence, based on observed residues (ATOM records):

>d3mksd2 b.69.4.1 (D:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
fvpqrttlrghmtsvitclqfednyvitgaddkmirvydsinkkfllqlsghdggvwalk
yahggilvsgstdrtvrvwdikkgccthvfeghnstvrcldiveyknikyivtgsrdntl
hvwklpkeyplvfhtpeenpyfvgvlrghmasvrtvsghgnivvsgsydntlivwdvaqm
kclyilsghtdriystiydherkrcisasmdttiriwdlengelmytlqghtalvgllrl
sdkflvsaaadgsirgwdandysrkfsyhhtnlsaittfyvsdnilvsgsenqfniynlr
sgklvhanilkdadqiwsvnfkgktlvaavekdgqsfleildfs

Timeline for d3mksd2:

• d3mksd2 first appeared in SCOPe 2.03
  
• d3mksd2 appears in SCOPe 2.07