Lineage for d1boga2 (1bog A:108-214)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 651987Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 651988Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 654118Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (23 proteins)
  6. 655938Protein Immunoglobulin light chain kappa constant domain, CL-kappa [88566] (3 species)
  7. 656129Species Mouse (Mus musculus) [TaxId:10090] [88567] (311 PDB entries)
  8. 656424Domain d1boga2: 1bog A:108-214 [21326]
    Other proteins in same PDB: d1boga1, d1bogb1, d1bogb2
    part of anti-gp120 (HIV-1) Fab CB 4-1

Details for d1boga2

PDB Entry: 1bog (more details), 2.6 Å

PDB Description: anti-p24 (hiv-1) fab fragment cb41 complexed with an epitope-homologous peptide
PDB Compounds: (A:) antibody (cb 4-1)

SCOP Domain Sequences for d1boga2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1boga2 b.1.1.2 (A:108-214) Immunoglobulin light chain kappa constant domain, CL-kappa {Mouse (Mus musculus) [TaxId: 10090]}
radaaptvsifppsseqltsgtasvvcflnnfypkeinvkwkidgserqngvldswteqd
skdstysmsstltltkdeyerhnsytceathktstspivksfnrnec

SCOP Domain Coordinates for d1boga2:

Click to download the PDB-style file with coordinates for d1boga2.
(The format of our PDB-style files is described here.)

Timeline for d1boga2:

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Domains from same chain:
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d1boga1