SCOPe 2.08: Domain d1jrhl2: 1jrh L:108-207

Lineage for d1jrhl2 (1jrh L:108-207)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)

6. Protein Immunoglobulin light chain kappa constant domain, CL-kappa [88566] (4 species)

7. Species Mouse (Mus musculus) [TaxId:10090] [88567] (374 PDB entries)
   Uniprot P01837# KAC_MOUSE Ig kappa chain C region; 99% sequence identity ! SQ NA # natural chimera; best hits are: Uniprot P01637 (Ig kappa chain V-V region T1) and Uniprot P01837 (Ig kappa chain C region) ! Uniprot P01837 # KAC_MOUSE Ig kappa chain C region ! Uniprot P01837 # KAC_MOUSE (P01837) Ig kappa chain C region ! SQ NA # part of Fab 28 against HIV-1 RT ! Uniprot P01837 # ! KAC_MOUSE Ig kappa chain C region

8. Domain d1jrhl2: 1jrh L:108-207 [21234]
   Other proteins in same PDB: d1jrhh1, d1jrhh2, d1jrhi_, d1jrhl1
   part of Fab A6

Details for d1jrhl2

PDB Entry: 1jrh, 2.8 Å

PDB Description: complex (antibody/antigen)

PDB Compounds: (L:) antibody a6

SCOPe Domain Sequences for d1jrhl2:

Sequence, based on SEQRES records:

>d1jrhl2 b.1.1.2 (L:108-207) Immunoglobulin light chain kappa constant domain, CL-kappa {Mouse (Mus musculus) [TaxId: 10090]}
radaaptvsifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqd
skdstysmsstltltkdeyerhnsytceathktstspivk

Sequence, based on observed residues (ATOM records):

>d1jrhl2 b.1.1.2 (L:108-207) Immunoglobulin light chain kappa constant domain, CL-kappa {Mouse (Mus musculus) [TaxId: 10090]}
radaaptvsifpcflnnfypkdinvkgvlnswtdqdskdstysmsstceathktstspiv
k

Timeline for d1jrhl2:

• d1jrhl2 first appeared (with stable ids) in SCOP 1.55
  
• d1jrhl2 appears in SCOPe 2.07