Lineage for d1d5ba2 (1d5b A:108-211)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2745637Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)
  6. 2748802Protein Immunoglobulin light chain kappa constant domain, CL-kappa [88566] (4 species)
  7. 2748803Species Human (Homo sapiens) [TaxId:9606] [88569] (147 PDB entries)
    including humanized antibodies (chimeric proteins with human constant domains)
    SQ NA # humanized antibody ! Uniprot P01834 # KAC_HUMAN Ig kappa chain C region ! SQ P01834 # KAC_HUMAN Ig kappa chain C region. ! SQ NA # engineered antibody
  8. 2749000Domain d1d5ba2: 1d5b A:108-211 [21220]
    Other proteins in same PDB: d1d5ba1, d1d5bb1, d1d5bb2, d1d5bb3, d1d5bh1, d1d5bh2, d1d5bh3, d1d5bl1
    part of humanized oxy-cope catalytic Fab az-28
    complexed with cd

Details for d1d5ba2

PDB Entry: 1d5b (more details), 2.8 Å

PDB Description: unliganded mature oxy-cope catalytic antibody
PDB Compounds: (A:) chimeric OXY-COPE catalytic ANTIBODY AZ-28 (light chain)

SCOPe Domain Sequences for d1d5ba2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1d5ba2 b.1.1.2 (A:108-211) Immunoglobulin light chain kappa constant domain, CL-kappa {Human (Homo sapiens) [TaxId: 9606]}
rtvaapsvfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqd
skdstyslsstltlskadyekhkvyacevthqglsspvtksfnr

SCOPe Domain Coordinates for d1d5ba2:

Click to download the PDB-style file with coordinates for d1d5ba2.
(The format of our PDB-style files is described here.)

Timeline for d1d5ba2: