SCOPe 2.08: Domain d3k0va_: 3k0v A:

Lineage for d3k0va_ (3k0v A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
   Similar in architecture to the superfamily I but partly differs in topology

5. Family c.94.1.0: automated matches [191309] (1 protein)
   not a true family

6. Protein automated matches [190039] (161 species)
   not a true protein

7. Species Cow (Bos taurus) [TaxId:9913] [225036] (50 PDB entries)

8. Domain d3k0va_: 3k0v A: [212150]
   automated match to d1iq7a_
   complexed with co3, fe, so4, zn

Details for d3k0va_

PDB Entry: 3k0v, 1.91 Å

PDB Description: removal of sugars and sugars-like molecules from the solution by c- lobe of lactoferrin: crystal structure of the complex of c-lobe with beta-d-glucopyranosyl-(1->4)-beta-d-galactopyranosyl-(1->4)-alpha-d- glucopyranose at 1.9 a resolution

PDB Compounds: (A:) lactotransferrin

SCOPe Domain Sequences for d3k0va_:

Sequence, based on SEQRES records:

>d3k0va_ c.94.1.0 (A:) automated matches {Cow (Bos taurus) [TaxId: 9913]}
ytrvvwcavgpeeqkkcqqwsqqsgqnvtcatasttddcivlvlkgeadalnldggyiyt
agkcglvpvlaenrksskhssldcvlrptegylavavvkkanegltwnslkdkkschtav
drtagwnipmglivnqtgscafdeffsqscapgadpksrlcalcagddqgldkcvpnske
kyygytgafrclaedvgdvafvkndtvwentngestadwaknlkredfrllcldgtrkpv
teaqschlavapnhavvsrsdraahveqvllhqqalfgkngkncpdkfclfksetknllf
ndnteclaklggrptyeeylgteyvtaianlkkcstsplleacaf

Sequence, based on observed residues (ATOM records):

>d3k0va_ c.94.1.0 (A:) automated matches {Cow (Bos taurus) [TaxId: 9913]}
ytrvvwcavgpeeqkkcqqwsqqsgqnvtcatasttddcivlvlkgeadalnldggyiyt
agkcglvpvlaenrksskhssldcvlrptegylavavvkkanegltwnslkdkkschtav
drtagwnipmglivnqtgscafdeffsqscapgadpksrlcalcagddqgldkcvpnske
kyygytgafrclaedvgdvafvkndtvwentngestadwaknlkredfrllcldgtrkpv
teaqschlavapnhavvsrsdraahveqvllhqqalfgkngkncpdkfclfksetknllf
ndnteclaklggrptyeeylgteyvtaianlkkcsleacaf

Timeline for d3k0va_:

• d3k0va_ first appeared in SCOPe 2.03
  
• d3k0va_ appears in SCOPe 2.07